BLASTX nr result

ID: Bupleurum21_contig00037252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037252
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22262.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002278808.1| PREDICTED: uncharacterized protein LOC100245...   103   1e-20
ref|XP_002875495.1| predicted protein [Arabidopsis lyrata subsp....    95   5e-18
gb|AAK96752.1| Unknown protein [Arabidopsis thaliana] gi|1797871...    91   7e-17
ref|NP_566845.1| uncharacterized protein [Arabidopsis thaliana] ...    91   7e-17

>emb|CBI22262.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  106 bits (264), Expect = 2e-21
 Identities = 66/156 (42%), Positives = 89/156 (57%), Gaps = 20/156 (12%)
 Frame = +1

Query: 1   EAWFDTISFLGSDTDEDFVSVHED-LP----------SGQVLQYETSSCTVDNKCLYKNI 147
           EAWFDT+S L S++D++F SVH D LP          SGQVLQYETSSC VDN   Y+  
Sbjct: 100 EAWFDTVSILDSESDDEFTSVHGDFLPLVGNAIGNGSSGQVLQYETSSCIVDNGGKYEEY 159

Query: 148 HEKLMKIDNGKTEMLLDRDGIMEPNGFKLLKNID--------GVKEEQHDGEEKSPENMK 303
           HE+++K D G +E  L +D   E +GF ++   D         +KE + D  +++ +N  
Sbjct: 160 HERILKADGGISEKFLSKDEYKEASGFSVISAQDHSYESFNSSLKEARRDSVDRTLDNTL 219

Query: 304 IHSLSPL-DHVSFNDIIINASQPPRQSQKRKSKVIR 408
           +  L  L  +VSFND I N      QSQ+R S VIR
Sbjct: 220 MPGLPLLVPNVSFNDKIFNQPCVSPQSQRRTSTVIR 255


>ref|XP_002278808.1| PREDICTED: uncharacterized protein LOC100245770 [Vitis vinifera]
          Length = 564

 Score =  103 bits (257), Expect = 1e-20
 Identities = 67/162 (41%), Positives = 91/162 (56%), Gaps = 26/162 (16%)
 Frame = +1

Query: 1   EAWFDTISFLGSDTDEDFVSVHED-LP----------SGQVLQYETSSCTVDNKCLYKNI 147
           EAWFDT+S L S++D++F SVH D LP          SGQVLQYETSSC VDN   Y+  
Sbjct: 100 EAWFDTVSILDSESDDEFTSVHGDFLPLVGNAIGNGSSGQVLQYETSSCIVDNGGKYEEY 159

Query: 148 HEKLMKIDNGKTEMLLDRDGIMEPNGFKLL------KNID--------GVKEEQHDGEEK 285
           HE+++K D G +E  L +D   E +GF ++      K +D         +KE + D  ++
Sbjct: 160 HERILKADGGISEKFLSKDEYKEASGFSVIISTKKKKMLDHSYESFNSSLKEARRDSVDR 219

Query: 286 SPENMKIHSLSPL-DHVSFNDIIINASQPPRQSQKRKSKVIR 408
           + +N  +  L  L  +VSFND I N      QSQ+R S VIR
Sbjct: 220 TLDNTLMPGLPLLVPNVSFNDKIFNQPCVSPQSQRRTSTVIR 261


>ref|XP_002875495.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321333|gb|EFH51754.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 513

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 27/164 (16%)
 Frame = +1

Query: 1   EAWFDTISFLGSDTDEDFVSVHE---------------DLPSGQVLQYETSSCTVDNKCL 135
           +AWFD++S L SD DEDF+S+ E               ++P+GQV+Q+E+SSC VD K  
Sbjct: 56  DAWFDSVSVLDSDEDEDFISLPEAENVPSAPSAGGATGNIPNGQVVQFESSSCIVDGKGK 115

Query: 136 YKNIHEKLMKIDNGKTEMLLDRDGIMEPNGFKLL-----------KNIDGVKEEQHDGEE 282
           Y+  HE  +KID  KTE  + +    +P+G  +L            +  G+KE++ + +E
Sbjct: 116 YEEYHETYLKIDGSKTEKFVSKGMYKDPSGLSVLTGNNKKKLMDHASFKGLKEQKRNSQE 175

Query: 283 KSPENMKIHSLSPL-DHVSFNDIIINASQPPRQSQKRKSKVIRL 411
           K+       SLS L   VSFND  +N+      SQKRKS V RL
Sbjct: 176 KTLRT----SLSRLMPTVSFNDKTLNSP----TSQKRKSAVYRL 211


>gb|AAK96752.1| Unknown protein [Arabidopsis thaliana] gi|17978713|gb|AAL47350.1|
           unknown protein [Arabidopsis thaliana]
          Length = 513

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 23/160 (14%)
 Frame = +1

Query: 1   EAWFDTISFLGSDTDEDFVSVHED---------------LPSGQVLQYETSSCTVDNKCL 135
           +AWFD++S L SD DEDF+S+ E+               +P+GQV+Q+E+SSC VD K  
Sbjct: 56  DAWFDSVSVLDSDEDEDFISLPEENVPSTPSAGGATGNNIPNGQVVQFESSSCFVDGKGK 115

Query: 136 YKNIHEKLMKIDNGKTEMLLDRDGIMEPNGFKLLKNIDGVKEEQH-------DGEEKSPE 294
           Y+  HE  +KID  K E  + +    +P+G  +L   +  K   H       D +  S E
Sbjct: 116 YEEYHEAYLKIDGSKAEKFVSKGMYKDPSGLSVLTGNNKKKLMDHASFKGLKDPKRNSQE 175

Query: 295 NMKIHSLSPL-DHVSFNDIIINASQPPRQSQKRKSKVIRL 411
                SLS L   VSFND  +N+      SQKRKS V RL
Sbjct: 176 KTLRTSLSRLMPTVSFNDKTLNSP----TSQKRKSAVYRL 211


>ref|NP_566845.1| uncharacterized protein [Arabidopsis thaliana]
           gi|334185691|ref|NP_001189999.1| uncharacterized protein
           [Arabidopsis thaliana] gi|9294326|dbj|BAB02223.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|227206342|dbj|BAH57226.1| AT3G29180 [Arabidopsis
           thaliana] gi|332644025|gb|AEE77546.1| uncharacterized
           protein [Arabidopsis thaliana]
           gi|332644026|gb|AEE77547.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 513

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 23/160 (14%)
 Frame = +1

Query: 1   EAWFDTISFLGSDTDEDFVSVHED---------------LPSGQVLQYETSSCTVDNKCL 135
           +AWFD++S L SD DEDF+S+ E+               +P+GQV+Q+E+SSC VD K  
Sbjct: 56  DAWFDSVSVLDSDEDEDFISLPEENVPSTPSAGGATGNNIPNGQVVQFESSSCFVDGKGK 115

Query: 136 YKNIHEKLMKIDNGKTEMLLDRDGIMEPNGFKLLKNIDGVKEEQH-------DGEEKSPE 294
           Y+  HE  +KID  K E  + +    +P+G  +L   +  K   H       D +  S E
Sbjct: 116 YEEYHETYLKIDGSKAEKFVSKGMYKDPSGLSVLTGNNKKKLMDHASFKGLKDPKRNSQE 175

Query: 295 NMKIHSLSPL-DHVSFNDIIINASQPPRQSQKRKSKVIRL 411
                SLS L   VSFND  +N+      SQKRKS V RL
Sbjct: 176 KTLRTSLSRLMPTVSFNDKTLNSP----TSQKRKSAVYRL 211


Top