BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037232
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85338.1| putative retrotransposon protein [Phyllostachys e...    66   3e-09
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                 63   2e-08
emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                   61   8e-08
emb|CAG24063.1| putative integrase [Zea mays]                          61   1e-07
emb|CAG24062.1| putative integrase [Zea mays]                          61   1e-07

>gb|ADB85338.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1087

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
 Frame = -1

Query: 255  SFEINQINREDNSLADQLSRLTQAERNQLEGAVYFEELE------TPTISEIQVLMVSSG 94
            +FE+  I R+DN LADQL+R+  +    L+G V+ E+L+      TP IS I+ + +   
Sbjct: 987  NFEVQFIPRKDNFLADQLARIASSRSQVLKG-VFLEQLQKPSLVDTPEISPIETVSLKYE 1045

Query: 93   DSWMTPIISYIKEGTVPEDPVEAKRLRSKS 4
            D+WM PI  Y++   VP+D +EA RL  K+
Sbjct: 1046 DTWMDPIYKYLQTSFVPDDDLEAYRLSRKA 1075


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/100 (35%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
 Frame = -1

Query: 303 LQRYLVKVKRALQKFESFEINQINREDNSLADQLSRLTQAERNQLEGAVYFEELETPTIS 124
           +++YL +VK  L+ F+SF++ QI R  N+ AD L+ L  +  ++L   V  ++L T +++
Sbjct: 620 MKKYLERVKGVLRLFKSFQVRQIPRGQNAHADLLAMLATSLGSKLPQTVMVKDLLTSSLT 679

Query: 123 EIQVLMVSS---GDSWMTPIISYIKEGTVPEDPVEAKRLR 13
            I V+ V S   G S M  I+++++ G +PED V A+++R
Sbjct: 680 GISVIEVHSICVGPSQMDSIVTFLQHGVLPEDKVVAEKVR 719


>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 25/125 (20%)
 Frame = -1

Query: 303  LQRYLVKVKRALQKFESFEINQINREDNSLADQLSRLTQAERNQLEGAVYFEELETPTIS 124
            +  YL +V++  + F  F+I  I R++N L DQL+R+    R+ +   V+ E+L +P++ 
Sbjct: 1590 MSSYLAEVRKLEKHFFGFQIQHIPRKENFLVDQLARMAST-RSTVPPGVFLEQLNSPSVV 1648

Query: 123  E--------IQVLMVSSGD-----------------SWMTPIISYIKEGTVPEDPVEAKR 19
            E        +QV   + G+                  WMT I +Y++  T+PED VEA R
Sbjct: 1649 EPSENIHDSLQVEQTNQGNMDAPQVVDGWRCHDHGRDWMTSIYNYLQHDTIPEDDVEADR 1708

Query: 18   LRSKS 4
            +  K+
Sbjct: 1709 IARKA 1713


>emb|CAG24063.1| putative integrase [Zea mays]
          Length = 113

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
 Frame = -1

Query: 297 RYLVKVKRALQKFESFEINQINREDNSLADQLSRLTQAERNQLEGAVYFEELETPTISEI 118
           +Y   V++   KFE  E + + R+ N+ AD LS+L    R Q+   V+ +E++ P+IS  
Sbjct: 10  KYCAAVRKLEDKFEGLEFHHVERDRNTAADVLSKLGSG-RTQVPPGVFVQEIQQPSISMD 68

Query: 117 QV-------LMVSSGDSWMTPIISYIKEGTVPEDPVEAKRLRSKS 4
           Q         + S  D W  PII YIK    P+D   A+R+  +S
Sbjct: 69  QTEECNIIDQLESDSDDWRRPIIKYIKNEEEPDDKNSAERIARQS 113


>emb|CAG24062.1| putative integrase [Zea mays]
          Length = 113

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
 Frame = -1

Query: 297 RYLVKVKRALQKFESFEINQINREDNSLADQLSRLTQAERNQLEGAVYFEELETPTISEI 118
           +Y   V++   KFE  E + + R+ N+ AD LS+L    R Q+   V+ +E++ P+IS  
Sbjct: 10  KYCAAVRKLEDKFEGLEFHHVERDRNTAADVLSKLGSG-RTQVPPGVFVQEIQQPSISMD 68

Query: 117 QV-------LMVSSGDSWMTPIISYIKEGTVPEDPVEAKRLRSKS 4
           Q         + S  D W  PII YIK    P+D   A+R+  +S
Sbjct: 69  QTEECNIIDQLESDSDDWRRPIIKYIKNEEEPDDKNSAERIARQS 113