BLASTX nr result

ID: Bupleurum21_contig00037216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037216
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61549.1| hypothetical protein OsJ_15884 [Oryza sativa Japo...    62   4e-08
gb|EEC77845.1| hypothetical protein OsI_17087 [Oryza sativa Indi...    62   4e-08
emb|CAE03260.1| OSJNBa0011J08.15 [Oryza sativa Japonica Group]         62   4e-08
ref|XP_002874331.1| predicted protein [Arabidopsis lyrata subsp....    60   2e-07
gb|EAY76990.1| hypothetical protein OsI_04946 [Oryza sativa Indi...    60   2e-07

>gb|EEE61549.1| hypothetical protein OsJ_15884 [Oryza sativa Japonica Group]
          Length = 204

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/69 (37%), Positives = 43/69 (62%)
 Frame = -3

Query: 362 ICDCGRRAKMYTSWSLKNPGRRFYTCCKSQNSGCDYFEWYDLEIEGRLGDVITHLNNRRI 183
           +CDC R+A  + SWS  NP RR+ TC ++++ GC ++ WY+ E    L  V+  L+N   
Sbjct: 65  LCDCRRKAARWISWSEDNPSRRYLTCARARDGGCTFWSWYEPETTPYLRQVLNDLHNVVR 124

Query: 182 FLEEKTALL 156
            L+E+ ++L
Sbjct: 125 GLKEEKSIL 133


>gb|EEC77845.1| hypothetical protein OsI_17087 [Oryza sativa Indica Group]
          Length = 204

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/69 (37%), Positives = 43/69 (62%)
 Frame = -3

Query: 362 ICDCGRRAKMYTSWSLKNPGRRFYTCCKSQNSGCDYFEWYDLEIEGRLGDVITHLNNRRI 183
           +CDC R+A  + SWS  NP RR+ TC ++++ GC ++ WY+ E    L  V+  L+N   
Sbjct: 65  LCDCRRKAARWISWSEDNPSRRYLTCARARDGGCTFWSWYEPETTPYLRQVLNDLHNVVR 124

Query: 182 FLEEKTALL 156
            L+E+ ++L
Sbjct: 125 GLKEEKSIL 133


>emb|CAE03260.1| OSJNBa0011J08.15 [Oryza sativa Japonica Group]
          Length = 234

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/69 (37%), Positives = 43/69 (62%)
 Frame = -3

Query: 362 ICDCGRRAKMYTSWSLKNPGRRFYTCCKSQNSGCDYFEWYDLEIEGRLGDVITHLNNRRI 183
           +CDC R+A  + SWS  NP RR+ TC ++++ GC ++ WY+ E    L  V+  L+N   
Sbjct: 95  LCDCRRKAARWISWSEDNPSRRYLTCARARDGGCTFWSWYEPETTPYLRQVLNDLHNVVR 154

Query: 182 FLEEKTALL 156
            L+E+ ++L
Sbjct: 155 GLKEEKSIL 163


>ref|XP_002874331.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320168|gb|EFH50590.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 160

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/44 (52%), Positives = 30/44 (68%)
 Frame = -3

Query: 365 YICDCGRRAKMYTSWSLKNPGRRFYTCCKSQNSGCDYFEWYDLE 234
           Y CDCG +A ++ +W+  NPGRRFY C   + S C+YF W DLE
Sbjct: 30  YECDCGTQALIFQAWTDANPGRRFYRCGAGRRSECNYFRWRDLE 73


>gb|EAY76990.1| hypothetical protein OsI_04946 [Oryza sativa Indica Group]
          Length = 156

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/73 (34%), Positives = 43/73 (58%)
 Frame = -3

Query: 362 ICDCGRRAKMYTSWSLKNPGRRFYTCCKSQNSGCDYFEWYDLEIEGRLGDVITHLNNRRI 183
           +C CG +A  + SWS+ NPGRR+Y  C+++ +GCD+F+WY+      L +++  L    +
Sbjct: 35  MCRCGAKAVRWISWSVDNPGRRYYR-CRNRGAGCDFFDWYEPATSSFLRELLNDLREAML 93

Query: 182 FLEEKTALLEEKV 144
            L  +   L+  V
Sbjct: 94  SLRREKNELQRCV 106


Top