BLASTX nr result

ID: Bupleurum21_contig00037192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037192
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22919.3| unnamed protein product [Vitis vinifera]               60   1e-07
emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]    60   1e-07
ref|XP_002519186.1| conserved hypothetical protein [Ricinus comm...    58   7e-07
ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002312344.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>emb|CBI22919.3| unnamed protein product [Vitis vinifera]
          Length = 848

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = -1

Query: 252 QAKVNVQKR-GLNQNCSRNLVGQKEQGELMXXXXXXXXXXXXXXXXXXXXXXNPPGVLRQ 76
           QAKVNVQ+R GLN + +R+ VG +EQ E+                       N PGVLRQ
Sbjct: 301 QAKVNVQRREGLNPSTNRSSVGLREQNEVKSSQPFKSQSNTQKGVHKKPSTPNAPGVLRQ 360

Query: 75  NNQKQNCVAERDKVALKS 22
           NNQKQNC+ ++DK+  KS
Sbjct: 361 NNQKQNCMVDKDKLPSKS 378


>emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]
          Length = 955

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = -1

Query: 252 QAKVNVQKR-GLNQNCSRNLVGQKEQGELMXXXXXXXXXXXXXXXXXXXXXXNPPGVLRQ 76
           QAKVNVQ+R GLN + +R+ VG +EQ E+                       N PGVLRQ
Sbjct: 347 QAKVNVQRREGLNPSTNRSSVGLREQNEVKSSQPFKSQSNTQKGVHKKPSTPNAPGVLRQ 406

Query: 75  NNQKQNCVAERDKVALKS 22
           NNQKQNC+ ++DK+  KS
Sbjct: 407 NNQKQNCMVDKDKLPSKS 424


>ref|XP_002519186.1| conserved hypothetical protein [Ricinus communis]
           gi|223541501|gb|EEF43050.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 847

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = -1

Query: 252 QAKVNVQKR-GLNQNCSRNLVGQKEQGELMXXXXXXXXXXXXXXXXXXXXXXNPPGVLRQ 76
           QAKVNVQ+R GLN + SR LVGQK+Q E +                       P  VLRQ
Sbjct: 321 QAKVNVQRREGLNTSNSRTLVGQKDQSEAVSSQNIRSQPNIQKSLPRKSVHNGPT-VLRQ 379

Query: 75  NNQKQNCVAERDKVALKSLPHANSQ 1
           NNQKQNC+ ++DK +    P +NSQ
Sbjct: 380 NNQKQNCIVDKDKSS--KSPISNSQ 402


>ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|222863965|gb|EEF01096.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
 Frame = -1

Query: 252 QAKVNVQKR-GLNQNCSRNLVGQKEQGELMXXXXXXXXXXXXXXXXXXXXXXNPPGVLRQ 76
           QAK NVQ+R GLN + S+  VGQKEQ E+                          G LRQ
Sbjct: 346 QAKFNVQRREGLNASSSQGFVGQKEQAEVSSSQPFKSHPNFQKSSQKRSPILKASGALRQ 405

Query: 75  NNQKQNCVAERDKVALKSL 19
           NNQKQNC+ ++DK+  K L
Sbjct: 406 NNQKQNCMMDKDKLPSKPL 424


>ref|XP_002312344.1| predicted protein [Populus trichocarpa] gi|222852164|gb|EEE89711.1|
           predicted protein [Populus trichocarpa]
          Length = 934

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = -1

Query: 252 QAKVNVQKR-GLNQNCSRNLVGQKEQGELMXXXXXXXXXXXXXXXXXXXXXXNPPGVLRQ 76
           QAKVNVQ+R GLN +  +  VGQKE  E+                       N  GVLRQ
Sbjct: 345 QAKVNVQRREGLNSSSRQGCVGQKELREVSSSQSFKCQPNVQKSLQKRSPVQNTSGVLRQ 404

Query: 75  NNQKQNCVAERDKVALKSL 19
           NNQKQNC+ ++DK+  K L
Sbjct: 405 NNQKQNCIMDKDKLPSKPL 423


Top