BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037172
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containi...   147   9e-34
ref|XP_004170735.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
ref|XP_004153972.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
ref|XP_002533676.1| pentatricopeptide repeat-containing protein,...   116   2e-24
ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24

>ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/117 (59%), Positives = 92/117 (78%)
 Frame = -3

Query: 431 RFGMLKEALAIILKLVTFADSRIWVALMSACRVHDNQLLAEFAAKMLFQLEPENAGYHTL 252
           R G LKEAL +ILKLVT  DSRIW AL++A RVH+++ L E+AA+ L +LEP+N GY+TL
Sbjct: 604 RSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKLLELEPDNVGYYTL 663

Query: 251 LSNVQASLEGWSEVEEIRDYVQDSNLIKQPGWSCIEANGLINGFVAGDRSHPRVLEI 81
            SN++ASLE W EVEE+R  + + +L K+PGWSCIE  G+I+GFV+GD SH +V EI
Sbjct: 664 WSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMIHGFVSGDTSHHQVEEI 720


>ref|XP_004170735.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 402

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/122 (53%), Positives = 89/122 (72%)
 Frame = -3

Query: 419 LKEALAIILKLVTFADSRIWVALMSACRVHDNQLLAEFAAKMLFQLEPENAGYHTLLSNV 240
           ++EA AIIL++ +  D RIW ALM ACRV+ +  +A +AA  L +LEP+N GY+TLLSN 
Sbjct: 279 VREAFAIILRMTSLCDGRIWGALMGACRVYGDNKIANYAAHRLLELEPDNVGYYTLLSNS 338

Query: 239 QASLEGWSEVEEIRDYVQDSNLIKQPGWSCIEANGLINGFVAGDRSHPRVLEIYETLFNL 60
           QAS+  W E E++R  V + +L+K+PGWS IE NG I+GFV+GDRSH R  EIY+ L  +
Sbjct: 339 QASVGQWHEAEKLRSLVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNRTNEIYDVLVYI 398

Query: 59  SR 54
           +R
Sbjct: 399 NR 400


>ref|XP_004153972.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Cucumis sativus]
          Length = 591

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/122 (53%), Positives = 89/122 (72%)
 Frame = -3

Query: 419 LKEALAIILKLVTFADSRIWVALMSACRVHDNQLLAEFAAKMLFQLEPENAGYHTLLSNV 240
           ++EA AIIL++ +  D RIW ALM ACRV+ +  +A +AA  L +LEP+N GY+TLLSN 
Sbjct: 468 VREAFAIILRMTSLCDGRIWGALMGACRVYGDNKIANYAAHRLLELEPDNVGYYTLLSNS 527

Query: 239 QASLEGWSEVEEIRDYVQDSNLIKQPGWSCIEANGLINGFVAGDRSHPRVLEIYETLFNL 60
           QAS+  W E E++R  V + +L+K+PGWS IE NG I+GFV+GDRSH R  EIY+ L  +
Sbjct: 528 QASVGQWHEAEKLRSLVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNRTNEIYDVLVYI 587

Query: 59  SR 54
           +R
Sbjct: 588 NR 589


>ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526427|gb|EEF28706.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 726

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/114 (47%), Positives = 80/114 (70%)
 Frame = -3

Query: 431 RFGMLKEALAIILKLVTFADSRIWVALMSACRVHDNQLLAEFAAKMLFQLEPENAGYHTL 252
           R G +KEALA+I+++V  ADSRIW AL+++CRVH ++ + EFAA+ L ++E +N GY+TL
Sbjct: 582 RCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLEMESDNVGYYTL 641

Query: 251 LSNVQASLEGWSEVEEIRDYVQDSNLIKQPGWSCIEANGLINGFVAGDRSHPRV 90
           LSN+QA +  W EVE++R  + + +L K PGWSCI   G    F++   S  R+
Sbjct: 642 LSNIQAMVGKWDEVEQVRKVIHEKDLRKTPGWSCIVGKGRNYCFISEGLSDNRL 695


>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/129 (44%), Positives = 83/129 (64%)
 Frame = -3

Query: 431 RFGMLKEALAIILKLVTFADSRIWVALMSACRVHDNQLLAEFAAKMLFQLEPENAGYHTL 252
           R G LKEA  +I  +    D  +W AL+ ACR+H N  L E +A+ LF+L+P+N GY+ L
Sbjct: 512 RAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVL 571

Query: 251 LSNVQASLEGWSEVEEIRDYVQDSNLIKQPGWSCIEANGLINGFVAGDRSHPRVLEIYET 72
           LSN+ A    W +VE +R  +++S L+K PG+S ++  G ++ F+ GDR HP+  +IYE 
Sbjct: 572 LSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEY 631

Query: 71  LFNLSRKLQ 45
           L  LS KLQ
Sbjct: 632 LEKLSMKLQ 640