BLASTX nr result

ID: Bupleurum21_contig00037129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037129
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301262.1| predicted protein [Populus trichocarpa] gi|2...   252   3e-65
ref|XP_002320709.1| predicted protein [Populus trichocarpa] gi|2...   251   4e-65
ref|XP_003517014.1| PREDICTED: cyclin-U2-1-like [Glycine max]         249   2e-64
gb|ACU13246.1| unknown [Glycine max]                                  248   4e-64
ref|XP_002880155.1| CYCP3_1 [Arabidopsis lyrata subsp. lyrata] g...   246   2e-63

>ref|XP_002301262.1| predicted protein [Populus trichocarpa] gi|222842988|gb|EEE80535.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  252 bits (643), Expect = 3e-65
 Identities = 121/146 (82%), Positives = 133/146 (91%), Gaps = 1/146 (0%)
 Frame = +1

Query: 1   PDMSVQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNYPEFRISPRNVHRLLITTIMVASK 180
           PD+++QSYLER+FRYTRAGPSVYVVAYVYIDRFCQ  P FRI+ RNVHRLLITTIMVASK
Sbjct: 72  PDLTIQSYLERVFRYTRAGPSVYVVAYVYIDRFCQANPGFRINSRNVHRLLITTIMVASK 131

Query: 181 YVEDMNYRNAYFARVGGLTTKEINHLEFEFLFLMGFKFHVNVSVFESYCCHLEREVSAGG 360
           YVEDMNYRN+YFARVGGLTT E+N LE EF+FLMGFK HVNVSVFESYCCHLEREV  GG
Sbjct: 132 YVEDMNYRNSYFARVGGLTTNELNKLELEFVFLMGFKLHVNVSVFESYCCHLEREVGIGG 191

Query: 361 GYQIEKTLRCAEEIKS-RERKQRYNQ 435
           GY IEKTLRCAEEIKS ++ ++RYNQ
Sbjct: 192 GYHIEKTLRCAEEIKSGQQEEKRYNQ 217


>ref|XP_002320709.1| predicted protein [Populus trichocarpa] gi|222861482|gb|EEE99024.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  251 bits (642), Expect = 4e-65
 Identities = 121/146 (82%), Positives = 133/146 (91%), Gaps = 1/146 (0%)
 Frame = +1

Query: 1   PDMSVQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNYPEFRISPRNVHRLLITTIMVASK 180
           PD+++QSYLERIFRYTRAGPSVYVVAYVYIDRFCQ  PEFRI+ RNVHRLLITTIMVASK
Sbjct: 72  PDLTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQANPEFRINARNVHRLLITTIMVASK 131

Query: 181 YVEDMNYRNAYFARVGGLTTKEINHLEFEFLFLMGFKFHVNVSVFESYCCHLEREVSAGG 360
           YVEDMNYRN+YFARVGGLT   +N +E EFLFLMGFK HVNVSVFESYCCHLEREV  GG
Sbjct: 132 YVEDMNYRNSYFARVGGLTANVMNKMELEFLFLMGFKLHVNVSVFESYCCHLEREVGIGG 191

Query: 361 GYQIEKTLRCAEEIKSRERKQR-YNQ 435
           GY IEKTLRCAEEIKSR+++++ YNQ
Sbjct: 192 GYHIEKTLRCAEEIKSRQQEEKGYNQ 217


>ref|XP_003517014.1| PREDICTED: cyclin-U2-1-like [Glycine max]
          Length = 224

 Score =  249 bits (635), Expect = 2e-64
 Identities = 118/142 (83%), Positives = 130/142 (91%)
 Frame = +1

Query: 1   PDMSVQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNYPEFRISPRNVHRLLITTIMVASK 180
           PDM+++SYLERIFRYTRAGPSVYVVAYVYIDRFCQN P FRI+ RNVHRLLITTIMVASK
Sbjct: 73  PDMTIESYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASK 132

Query: 181 YVEDMNYRNAYFARVGGLTTKEINHLEFEFLFLMGFKFHVNVSVFESYCCHLEREVSAGG 360
           YVEDMN+RN+YFARVGGL T E+N LE EFLFLMGFK HVNVSVFESYCCHLEREVS GG
Sbjct: 133 YVEDMNFRNSYFARVGGLRTNELNELELEFLFLMGFKLHVNVSVFESYCCHLEREVSIGG 192

Query: 361 GYQIEKTLRCAEEIKSRERKQR 426
           GY IE+TLRCAEEIK++  ++R
Sbjct: 193 GYHIERTLRCAEEIKAKNIEER 214


>gb|ACU13246.1| unknown [Glycine max]
          Length = 226

 Score =  248 bits (633), Expect = 4e-64
 Identities = 119/145 (82%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
 Frame = +1

Query: 1   PDMSVQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNYPEFRISPRNVHRLLITTIMVASK 180
           PD+++QSYLERIFRYTRAGPSVYVVAYVYIDRFCQN P FRI+ RNVHRLLITTIMVASK
Sbjct: 73  PDLTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASK 132

Query: 181 YVEDMNYRNAYFARVGGLTTKEINHLEFEFLFLMGFKFHVNVSVFESYCCHLEREVSAGG 360
           Y+EDMN+RN+YFARVGGLTT E+N LE EFLF+MGFK HVNVSVFESYCCHLEREVS GG
Sbjct: 133 YMEDMNFRNSYFARVGGLTTNELNELELEFLFMMGFKLHVNVSVFESYCCHLEREVSIGG 192

Query: 361 GYQIEKTLRCAEEIKSR--ERKQRY 429
           GY IE+TL+CAEEIK++  ERK  Y
Sbjct: 193 GYHIERTLKCAEEIKAKNIERKGLY 217


>ref|XP_002880155.1| CYCP3_1 [Arabidopsis lyrata subsp. lyrata]
           gi|297325994|gb|EFH56414.1| CYCP3_1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 222

 Score =  246 bits (627), Expect = 2e-63
 Identities = 117/138 (84%), Positives = 128/138 (92%)
 Frame = +1

Query: 1   PDMSVQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNYPEFRISPRNVHRLLITTIMVASK 180
           PDM++QSYLERIFRYT+AGPSVYVVAYVYIDRFCQN   FRIS  NVHRLLITTIM+ASK
Sbjct: 67  PDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIMIASK 126

Query: 181 YVEDMNYRNAYFARVGGLTTKEINHLEFEFLFLMGFKFHVNVSVFESYCCHLEREVSAGG 360
           YVEDMNYRN+YFA+VGGL T+++N+LE EFLFLMGFK HVNVSVFESYCCHLEREVS GG
Sbjct: 127 YVEDMNYRNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCHLEREVSIGG 186

Query: 361 GYQIEKTLRCAEEIKSRE 414
           GYQIEK LRCAEEIKSR+
Sbjct: 187 GYQIEKALRCAEEIKSRQ 204


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