BLASTX nr result

ID: Bupleurum21_contig00037108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037108
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]    89   4e-16
emb|CAN76493.1| hypothetical protein VITISV_007584 [Vitis vinifera]    86   4e-15
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]    74   2e-11
emb|CAN80108.1| hypothetical protein VITISV_035396 [Vitis vinifera]    72   5e-11
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                       70   2e-10

>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
          Length = 590

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
 Frame = -2

Query: 317 TNKFLLLLQQKNYPSWRNLVVSLFNGYNLFGYLDGSISAPPL--GENGVWTDDYTQWFRQ 144
           T +    L   N+PSW     SL  GYNLFGY+DG+ + PPL    +   T  +  WFRQ
Sbjct: 16  TQQITARLTPTNFPSWNAQFESLLLGYNLFGYVDGTHTCPPLPTSTDAAATTAHHLWFRQ 75

Query: 143 DQXXXXXXXXXXXAEVMPLVAAANTSHKAWSTLSQLYATKSRTRVLQ 3
           D+             V+PL+A + TSH+AW+ L++LYA++SRTRV+Q
Sbjct: 76  DKLILSAILTSVSPAVIPLIATSKTSHQAWTKLTKLYASRSRTRVMQ 122


>emb|CAN76493.1| hypothetical protein VITISV_007584 [Vitis vinifera]
          Length = 1120

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = -2

Query: 317 TNKFLLLLQQKNYPSWRNLVVSLFNGYNLFGYLDGSISAPPL--GENGVWTDDYTQWFRQ 144
           T +    L   N+PSW     SL  GYNLFGY+DG+ + PPL    N   T  +  WFRQ
Sbjct: 16  TQQITARLTPTNFPSWHAQFESLLLGYNLFGYVDGTHTCPPLPTSTNAAATTAHHLWFRQ 75

Query: 143 DQXXXXXXXXXXXAEVMPLVAAANTSHKAWSTLSQLYATKSRTRVLQ 3
           D+             ++PL+A + TS++AW+ L++LY ++SRTRV+Q
Sbjct: 76  DKLILSAIMTSVSPTLIPLIATSQTSYQAWTKLTKLYVSRSRTRVMQ 122


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
 Frame = -2

Query: 368 TLLYSPLMVNNLLLSILTNKFLLLLQQKNYPSWRNLVVSLFNGYNLFGYLDGSISAPP-- 195
           +L+ S    + ++    T +  + L   N+PSW+    +L  GY+L G+LDG+ + P   
Sbjct: 12  SLISSTSCFDGIISINATAQLPIKLNNNNFPSWKAQFDALLYGYDLMGFLDGNKTCPSKE 71

Query: 194 -LGENG--VWTDDYTQWFRQDQXXXXXXXXXXXAEVMPLVAAANTSHKAWSTLSQLYATK 24
            + E+G  V   D+  W RQD+             V+PL+AAA +S  AW  L +LYA K
Sbjct: 72  IIAEDGTTVSNPDFVIWTRQDKLLLHAILASLSEGVVPLIAAATSSRDAWVKLHKLYANK 131

Query: 23  SRTRVL 6
           SR+RV+
Sbjct: 132 SRSRVM 137


>emb|CAN80108.1| hypothetical protein VITISV_035396 [Vitis vinifera]
          Length = 491

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 50/141 (35%), Positives = 63/141 (44%), Gaps = 4/141 (2%)
 Frame = -2

Query: 413 PILPTQQLHNLQQKPTLLYSPLMVNNLLLSILTNKFLLLLQQKNYPSWRNLVVSLFNGYN 234
           PILPT     L    T   +PL                 L   NY SW+    +LF GY+
Sbjct: 8   PILPTTNESQLLTINTAAQAPLK----------------LTSSNYLSWKIQFETLFIGYD 51

Query: 233 LFGYLDGSISAPP--LGENGVWTDD--YTQWFRQDQXXXXXXXXXXXAEVMPLVAAANTS 66
           L GY+DGS   PP  L  N V T +  YT W RQDQ             ++  +A ANTS
Sbjct: 52  LLGYIDGSKPCPPKTLTTNNVDTLNPAYTLWIRQDQLILNALIGSLSPTIISFIARANTS 111

Query: 65  HKAWSTLSQLYATKSRTRVLQ 3
            +AW+ L+  Y   SR R+ Q
Sbjct: 112 REAWTILANTYVKPSRGRIKQ 132


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
 Frame = -2

Query: 296 LQQKNYPSWRNLVVSLFNGYNLFGYLDGSISAPP---LGENGVWT--DDYTQWFRQDQXX 132
           L   N+  W   V +L +GY+L GY+DGS+  PP     ++GV T  +DYT W RQD+  
Sbjct: 32  LTDSNFVMWSRQVHALLDGYDLAGYVDGSVPIPPPTRTTDDGVVTTNNDYTLWKRQDKLV 91

Query: 131 XXXXXXXXXAEVMPLVAAANTSHKAWSTLSQLYATKSRTRVLQ 3
                      V PL++ ANTS + W TLS  +A  S   V Q
Sbjct: 92  YSALLGAISLSVQPLLSKANTSAEVWETLSSTFANPSWAHVQQ 134


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