BLASTX nr result

ID: Bupleurum21_contig00037101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037101
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI72266.1| ring zinc finger transcription factor [Citrus tri...    67   1e-09
ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like ...    66   3e-09
ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like ...    66   3e-09
ref|XP_004134225.1| PREDICTED: RING-H2 finger protein ATL2-like ...    65   6e-09
ref|XP_003550541.1| PREDICTED: RING-H2 finger protein ATL2-like ...    64   1e-08

>gb|AEI72266.1| ring zinc finger transcription factor [Citrus trifoliata]
          Length = 234

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/110 (38%), Positives = 58/110 (52%)
 Frame = -1

Query: 332 YAYSGKIMLISVIVLFVFCLSFAAFHFYXXXXXXXXXXXXXXXXXXXXXXSFTSDVSPDS 153
           YA SG+IML S+++LF   +     H Y                       F   V P +
Sbjct: 17  YALSGRIMLSSIVILFFVVILMVCLHLYARWYLVQARRRQVRRHRHRRTQ-FVFYVDPTN 75

Query: 152 PLSGAATKGLSSSVVNALSTFVYSASRKVASPLVCAVCLSEFKKNETGRV 3
           P S  +++GL SSV+ +L  FVYS S+  A  + CAVCLSEF++NE+GRV
Sbjct: 76  P-SATSSRGLDSSVLKSLPVFVYS-SKTHADAMDCAVCLSEFEENESGRV 123


>ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 2 [Vitis
           vinifera]
          Length = 320

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/111 (34%), Positives = 54/111 (48%)
 Frame = -1

Query: 338 TNYAYSGKIMLISVIVLFVFCLSFAAFHFYXXXXXXXXXXXXXXXXXXXXXXSFTSDVSP 159
           T YA SGKIML ++++LF   +     H Y                       F  D + 
Sbjct: 21  TGYALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRHHLVFYVDPTN 80

Query: 158 DSPLSGAATKGLSSSVVNALSTFVYSASRKVASPLVCAVCLSEFKKNETGR 6
            +    + T+GL +S++N+L  FVYS S+       CAVCLSEF++NE GR
Sbjct: 81  PAASVSSPTRGLDASILNSLPVFVYS-SKTHTDMSECAVCLSEFEENEKGR 130


>ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 1 [Vitis
           vinifera]
          Length = 317

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/111 (34%), Positives = 54/111 (48%)
 Frame = -1

Query: 338 TNYAYSGKIMLISVIVLFVFCLSFAAFHFYXXXXXXXXXXXXXXXXXXXXXXSFTSDVSP 159
           T YA SGKIML ++++LF   +     H Y                       F  D + 
Sbjct: 18  TGYALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRHHLVFYVDPTN 77

Query: 158 DSPLSGAATKGLSSSVVNALSTFVYSASRKVASPLVCAVCLSEFKKNETGR 6
            +    + T+GL +S++N+L  FVYS S+       CAVCLSEF++NE GR
Sbjct: 78  PAASVSSPTRGLDASILNSLPVFVYS-SKTHTDMSECAVCLSEFEENEKGR 127


>ref|XP_004134225.1| PREDICTED: RING-H2 finger protein ATL2-like [Cucumis sativus]
           gi|449503830|ref|XP_004162198.1| PREDICTED: RING-H2
           finger protein ATL2-like [Cucumis sativus]
          Length = 293

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 47/132 (35%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
 Frame = -1

Query: 392 ANMDDKYTPHLSITKTSITNYAYSGKIMLISVIVLFVFCLSFAAFHFYXXXXXXXXXXXX 213
           A M+D  TP    + + I ++A SGKIML ++I+L    L     H Y            
Sbjct: 3   AAMEDPSTP----SPSGIKDFALSGKIMLSAIIILLFVVLLIICLHLYARWYVLRARRRG 58

Query: 212 XXXXXXXXXXSFTSDVSPDSPLSGAAT---KGLSSSVVNALSTFVYSASRKVASPLVCAV 42
                      F  + S  S   GAA    +GL SSV+N+L  F +S S+  + P+ CAV
Sbjct: 59  NLRRRNRLVFYFEPENS--SAPHGAALSQHRGLDSSVLNSLPVFTFS-SKSHSDPIDCAV 115

Query: 41  CLSEFKKNETGR 6
           CLSEF++NE GR
Sbjct: 116 CLSEFEENEKGR 127


>ref|XP_003550541.1| PREDICTED: RING-H2 finger protein ATL2-like [Glycine max]
          Length = 245

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/111 (35%), Positives = 55/111 (49%)
 Frame = -1

Query: 335 NYAYSGKIMLISVIVLFVFCLSFAAFHFYXXXXXXXXXXXXXXXXXXXXXXSFTSDVSPD 156
           +YA+SGKIMLI+++VLF+  +     H Y                       F  D +  
Sbjct: 7   DYAFSGKIMLIAIVVLFIVIIIMLCLHVYVRRRLVNARRRPQLRRSNRPQFVFYMDPAAR 66

Query: 155 SPLSGAATKGLSSSVVNALSTFVYSASRKVASPLVCAVCLSEFKKNETGRV 3
             L+    +GL  SV++ L  F +SA+    +P  CAVCLSEF+  ETGRV
Sbjct: 67  IALT---RRGLHPSVISTLPMFTFSATN---NPTECAVCLSEFENGETGRV 111


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