BLASTX nr result

ID: Bupleurum21_contig00037079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037079
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    71   8e-11
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    67   1e-09
ref|XP_004150633.1| PREDICTED: uncharacterized protein LOC101216...    58   9e-07
emb|CAN79493.1| hypothetical protein VITISV_033374 [Vitis vinifera]    58   9e-07
ref|XP_004154142.1| PREDICTED: enzymatic polyprotein-like, parti...    57   2e-06

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = +3

Query: 3    LLKWKNVPTFESTWEDVATVNARFPSFHLEDKVNLTY*VYVMNPSNPPMLMTYARRKHK 179
            L+KWK +P FE+TWED++ ++ RFPSFHLEDKVN+     VM+    P L+TY RR +K
Sbjct: 1562 LIKWKGLPAFEATWEDMSPIHLRFPSFHLEDKVNVWGAGIVMHQLKKPNLITYKRRGNK 1620


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
 Frame = +3

Query: 3    LLKWKNVPTFESTWEDVATVNARFPSFHLEDKVNLTY*VYVMNPSN--PPMLMTYARRKH 176
            L+KW N+P FE+TWED A  NARFP FHLEDKV         +P+   PP++ TY+RR+ 
Sbjct: 1495 LIKWLNLPAFEATWEDAALFNARFPDFHLEDKVLNWEGSIAKSPTRIIPPIVHTYSRRRK 1554

Query: 177  K 179
            K
Sbjct: 1555 K 1555


>ref|XP_004150633.1| PREDICTED: uncharacterized protein LOC101216195 [Cucumis sativus]
          Length = 922

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = +3

Query: 3    LLKWKNVPTFESTWEDVATVNARFPSFHLEDKVNLTY*VYVMNPSNPPMLMTYARRKHK 179
            L+KWK +P  E+TWE V  +N +FP+FHLEDKVNL     V     PP++ TY R+  K
Sbjct: 858  LVKWKELPENEATWEAVYQMNQQFPTFHLEDKVNLEPRGIV----RPPIIHTYRRKGRK 912


>emb|CAN79493.1| hypothetical protein VITISV_033374 [Vitis vinifera]
          Length = 455

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = +3

Query: 3   LLKWKNVPTFESTWEDVATVNARFPSFHLEDKVNLTY*VYVMNPSNPPMLMTYARR 170
           L++WK++P FE+TWE  AT+  +FP FHL DKV     V+      PP+  TYARR
Sbjct: 399 LVQWKDLPDFEATWESFATIQNQFPEFHLVDKVV----VWEEGNDKPPVRFTYARR 450


>ref|XP_004154142.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
          Length = 566

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   LLKWKNVPTFESTWEDVATVNARFPSFHLEDKVNL 107
           L+KWKN+P  E+TWE V  +N +FP FHLEDKVNL
Sbjct: 532 LIKWKNLPNSEATWESVYLLNQQFPQFHLEDKVNL 566


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