BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037058
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containi...   234   1e-59
emb|CBI39592.3| unnamed protein product [Vitis vinifera]              234   1e-59
ref|XP_003609027.1| Pentatricopeptide repeat-containing protein ...   225   5e-57
ref|XP_002330195.1| predicted protein [Populus trichocarpa] gi|2...   219   3e-55
ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi...   217   1e-54

>ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  234 bits (596), Expect = 1e-59
 Identities = 116/212 (54%), Positives = 146/212 (68%)
 Frame = -3

Query: 637 LITKQHWSDXXXXXXXXXXXXXXXXXFNFGADPDVILSFFKWSQLQFKVFHSLEHYCRLF 458
           LI KQHWS                  FN  A PD+IL +FKW+Q +F   H++E +CRL 
Sbjct: 55  LIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLL 114

Query: 457 HLLADAKKYRKIRSLLYIFVKNERYTCSSVFHTLFSCSDRFSANSLIVDMLVLAYVNDCK 278
           HLLA+AK Y KIR+LL  F KN  Y+ S++FH+L        ANS+IVDMLV AYV + +
Sbjct: 115 HLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGE 174

Query: 277 LGLALEAFERAGDYGCKLSVFSCNPLLNLVVKEGKFGVVEFLYKEMIRRRVELNLISFNI 98
           + LALE F+RAGDYG +LS  SCNP+L  +VKEG+ GVVE +YKEMIRRR+ +N+++F++
Sbjct: 175 MDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDV 234

Query: 97  VINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
           VING CK GK  KA DVVEDMK WG  PSVIT
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
 Frame = -3

Query: 340 RFSANSLIVDMLVLAYVNDCKLGLALEAFERAGD-------YGCKLSVFSCNPLLNLVVK 182
           R   N +  D+++      CK+G     F++AGD       +G   SV + N +++   K
Sbjct: 224 RIGVNVVTFDVVINGL---CKVG----KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 181 EGKFGVVEFLYKEMIRRRVELNLISFNIVINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
            GK    + L KEM+ +R+  N I+FNI+I+GFC+   +  A  V E+M+  G++P+V+T
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/113 (28%), Positives = 60/113 (53%)
 Frame = -3

Query: 340 RFSANSLIVDMLVLAYVNDCKLGLALEAFERAGDYGCKLSVFSCNPLLNLVVKEGKFGVV 161
           R   N +  ++L+  +  D  +  A + FE     G + +V + N L+N +   GK    
Sbjct: 294 RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEA 353

Query: 160 EFLYKEMIRRRVELNLISFNIVINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
             L  +M    ++ N++++N +INGFCK   L +A ++++D+   G+ P+VIT
Sbjct: 354 LGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVIT 406


>emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  234 bits (596), Expect = 1e-59
 Identities = 116/212 (54%), Positives = 146/212 (68%)
 Frame = -3

Query: 637 LITKQHWSDXXXXXXXXXXXXXXXXXFNFGADPDVILSFFKWSQLQFKVFHSLEHYCRLF 458
           LI KQHWS                  FN  A PD+IL +FKW+Q +F   H++E +CRL 
Sbjct: 55  LIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLL 114

Query: 457 HLLADAKKYRKIRSLLYIFVKNERYTCSSVFHTLFSCSDRFSANSLIVDMLVLAYVNDCK 278
           HLLA+AK Y KIR+LL  F KN  Y+ S++FH+L        ANS+IVDMLV AYV + +
Sbjct: 115 HLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGE 174

Query: 277 LGLALEAFERAGDYGCKLSVFSCNPLLNLVVKEGKFGVVEFLYKEMIRRRVELNLISFNI 98
           + LALE F+RAGDYG +LS  SCNP+L  +VKEG+ GVVE +YKEMIRRR+ +N+++F++
Sbjct: 175 MDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDV 234

Query: 97  VINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
           VING CK GK  KA DVVEDMK WG  PSVIT
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
 Frame = -3

Query: 340 RFSANSLIVDMLVLAYVNDCKLGLALEAFERAGD-------YGCKLSVFSCNPLLNLVVK 182
           R   N +  D+++      CK+G     F++AGD       +G   SV + N +++   K
Sbjct: 224 RIGVNVVTFDVVINGL---CKVG----KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 181 EGKFGVVEFLYKEMIRRRVELNLISFNIVINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
            GK    + L KEM+ +R+  N I+FNI+I+GFC+   +  A  V E+M+  G++P+V+T
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/113 (28%), Positives = 60/113 (53%)
 Frame = -3

Query: 340 RFSANSLIVDMLVLAYVNDCKLGLALEAFERAGDYGCKLSVFSCNPLLNLVVKEGKFGVV 161
           R   N +  ++L+  +  D  +  A + FE     G + +V + N L+N +   GK    
Sbjct: 294 RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEA 353

Query: 160 EFLYKEMIRRRVELNLISFNIVINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
             L  +M    ++ N++++N +INGFCK   L +A ++++D+   G+ P+VIT
Sbjct: 354 LGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVIT 406


>ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510082|gb|AES91224.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  225 bits (574), Expect = 5e-57
 Identities = 110/212 (51%), Positives = 147/212 (69%)
 Frame = -3

Query: 637 LITKQHWSDXXXXXXXXXXXXXXXXXFNFGADPDVILSFFKWSQLQFKVFHSLEHYCRLF 458
           L++KQHWS+                  N G D +++L FFKWSQ ++++ + LE   ++ 
Sbjct: 26  LLSKQHWSELKPHLRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPTSKVL 85

Query: 457 HLLADAKKYRKIRSLLYIFVKNERYTCSSVFHTLFSCSDRFSANSLIVDMLVLAYVNDCK 278
           H LA++K+Y K+RS L  FVKNE++T SSVFH+L     R  A +LI+DMLVLAYV + +
Sbjct: 86  HFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLE 145

Query: 277 LGLALEAFERAGDYGCKLSVFSCNPLLNLVVKEGKFGVVEFLYKEMIRRRVELNLISFNI 98
           L  A EAF RA DYG KLS+ SCNPLL+ +VKE K G VE++YKEMI+RR+  NL +FNI
Sbjct: 146 LHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNI 205

Query: 97  VINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
            ING C+AGKL+KA D +EDMK WGI P+V+T
Sbjct: 206 FINGLCRAGKLNKAEDAIEDMKAWGISPNVVT 237



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/115 (26%), Positives = 62/115 (53%)
 Frame = -3

Query: 346 SDRFSANSLIVDMLVLAYVNDCKLGLALEAFERAGDYGCKLSVFSCNPLLNLVVKEGKFG 167
           +++   N +  + L+  +  D  +  A +AFE     G K ++ + N L+N +   GK  
Sbjct: 266 ANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLE 325

Query: 166 VVEFLYKEMIRRRVELNLISFNIVINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
               L+ +M+   ++ N++++N +INGFCK   + +A+ V +D+    + P+VIT
Sbjct: 326 EAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVIT 380


>ref|XP_002330195.1| predicted protein [Populus trichocarpa] gi|222871651|gb|EEF08782.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score =  219 bits (559), Expect = 3e-55
 Identities = 107/186 (57%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556 NFGADPDVILSFFKWSQLQFKVFHSLEHYCRLFHLLADAKKYRKIRSLLYIFVKNER-YT 380
           N GADP++IL +F WSQ +FK+ HSLE   R+ + LA  KKY KIRS L  FVK E+ Y+
Sbjct: 7   NSGADPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYS 66

Query: 379 CSSVFHTLFSCSDRFSANSLIVDMLVLAYVNDCKLGLALEAFERAGDYGCKLSVFSCNPL 200
            S++FH +    D F  NS++ DMLVLA+V + K+    EAF+RAGDYG KLS+ SCNPL
Sbjct: 67  VSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPL 126

Query: 199 LNLVVKEGKFGVVEFLYKEMIRRRVELNLISFNIVINGFCKAGKLHKASDVVEDMKVWGI 20
           L+ +VKE + G +EF+Y+EMI+R++ELN+ISFNIV+NG CK GKL++A DV+EDMKVWG+
Sbjct: 127 LSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGV 186

Query: 19  EPSVIT 2
            P+VIT
Sbjct: 187 SPNVIT 192



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/109 (26%), Positives = 60/109 (55%)
 Frame = -3

Query: 328 NSLIVDMLVLAYVNDCKLGLALEAFERAGDYGCKLSVFSCNPLLNLVVKEGKFGVVEFLY 149
           N +  ++L+  +  D  +  A+  F      G + +V + N L+N +  +GK      L 
Sbjct: 227 NEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALR 286

Query: 148 KEMIRRRVELNLISFNIVINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
            +M+   +E N+++ N++INGFCK   +++A ++  DM+  G++P+ +T
Sbjct: 287 DQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMT 335


>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
           gi|449524964|ref|XP_004169491.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  217 bits (553), Expect = 1e-54
 Identities = 116/214 (54%), Positives = 146/214 (68%), Gaps = 2/214 (0%)
 Frame = -3

Query: 637 LITKQHWSDXXXXXXXXXXXXXXXXXFNFG-ADPDVILSFFKWSQLQFKVFHSLEHYCRL 461
           LI++Q WS                     G  DP ++L +F WS+ +  V +S+E  CRL
Sbjct: 54  LISRQQWSILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRL 113

Query: 460 FHLLADAKKYRKIRSLLYIFVKNE-RYTCSSVFHTLFSCSDRFSANSLIVDMLVLAYVND 284
            +LLA+AK Y KIRS+L  FVK E   + S +FH+L  CS +F ANS+I DMLVLAYV +
Sbjct: 114 LNLLANAKHYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVEN 173

Query: 283 CKLGLALEAFERAGDYGCKLSVFSCNPLLNLVVKEGKFGVVEFLYKEMIRRRVELNLISF 104
            K  L LEAF+RAGDY  KLSV SCNPLL+ +VKE +FG VEF+YKEMIRR++  NLI+F
Sbjct: 174 SKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITF 233

Query: 103 NIVINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
           N VING CK GKL+KA DVV+DMKVWG  P+V+T
Sbjct: 234 NTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVT 267



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/114 (32%), Positives = 66/114 (57%)
 Frame = -3

Query: 343 DRFSANSLIVDMLVLAYVNDCKLGLALEAFERAGDYGCKLSVFSCNPLLNLVVKEGKFGV 164
           ++ S NS+  ++L+  +  D  L  AL+ FE     G K +V + N L+N +  EGK   
Sbjct: 297 NKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNE 356

Query: 163 VEFLYKEMIRRRVELNLISFNIVINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
            + L  EM+   ++ N+I++N +ING+CK   L +A ++ +++   G+ P+VIT
Sbjct: 357 AKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVIT 410



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
 Frame = -3

Query: 283 CKLGLALEAFERAGD---YGCKLSVFSCNPLLNLVVKEGKFGVV---EFLYKEMIRRRVE 122
           CK+G   +A +   D   +G   +V + N L++   K G+ G +   + + KEM+  +V 
Sbjct: 241 CKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVS 300

Query: 121 LNLISFNIVINGFCKAGKLHKASDVVEDMKVWGIEPSVIT 2
            N ++FN++I+GFCK   L  A  V E+M+  G++P+V+T
Sbjct: 301 PNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340