BLASTX nr result

ID: Bupleurum21_contig00037054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037054
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276945.1| PREDICTED: polygalacturonase At1g48100 [Viti...   249   2e-64
ref|XP_002318932.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-61
ref|XP_002512560.1| Polygalacturonase precursor, putative [Ricin...   239   2e-61
ref|XP_002330008.1| predicted protein [Populus trichocarpa] gi|2...   233   9e-60
ref|NP_563654.1| Pectin lyase-like protein [Arabidopsis thaliana...   233   1e-59

>ref|XP_002276945.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
           gi|296089826|emb|CBI39645.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score =  249 bits (636), Expect = 2e-64
 Identities = 118/138 (85%), Positives = 128/138 (92%)
 Frame = -3

Query: 414 SPNTDGIHIENSNNVKIYNSVISNGDDCVSIGAGSHDVDIRNITCGPSHGISIGSLGIRN 235
           SPNTDGIHIEN+N VKIYNS++SNGDDCVSIGAG H+VDIRNITCGPSHGISIGSLGIRN
Sbjct: 247 SPNTDGIHIENTNGVKIYNSIVSNGDDCVSIGAGCHNVDIRNITCGPSHGISIGSLGIRN 306

Query: 234 SRACVSNIRVTDSVIKHSTNGLRIKTYQGGSGSVSKVTFNNIHMDTVRNPIIINQFYCEA 55
           SRACVSNI VTDS+IKHS NG+RIKT+QGGSGSVSKVTFNNIHMDTVRNPIII+Q+YC  
Sbjct: 307 SRACVSNITVTDSIIKHSANGVRIKTWQGGSGSVSKVTFNNIHMDTVRNPIIIDQYYCLT 366

Query: 54  KGCANQTSAVFISDIEYS 1
           KGC NQTSAV IS I Y+
Sbjct: 367 KGCVNQTSAVLISHISYT 384


>ref|XP_002318932.1| predicted protein [Populus trichocarpa] gi|222857308|gb|EEE94855.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  239 bits (610), Expect = 2e-61
 Identities = 114/140 (81%), Positives = 129/140 (92%)
 Frame = -3

Query: 420 PLSPNTDGIHIENSNNVKIYNSVISNGDDCVSIGAGSHDVDIRNITCGPSHGISIGSLGI 241
           PLSPNTDGIHIEN+NNV+IYNSVISNGDDCVSIGAG H+VDI+NITCGPSHGISIGSLGI
Sbjct: 253 PLSPNTDGIHIENTNNVQIYNSVISNGDDCVSIGAGCHNVDIKNITCGPSHGISIGSLGI 312

Query: 240 RNSRACVSNIRVTDSVIKHSTNGLRIKTYQGGSGSVSKVTFNNIHMDTVRNPIIINQFYC 61
            NSRACVSNI V DSVIKHS NG+RIKT+QGG GSVSK++F+NI+M+TVRNPIII+Q+YC
Sbjct: 313 GNSRACVSNITVRDSVIKHSDNGVRIKTWQGGYGSVSKISFHNINMETVRNPIIIDQYYC 372

Query: 60  EAKGCANQTSAVFISDIEYS 1
           + K C NQTSAV ISDI Y+
Sbjct: 373 QTKNCTNQTSAVHISDILYT 392


>ref|XP_002512560.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223548521|gb|EEF50012.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 470

 Score =  239 bits (609), Expect = 2e-61
 Identities = 114/139 (82%), Positives = 128/139 (92%)
 Frame = -3

Query: 417 LSPNTDGIHIENSNNVKIYNSVISNGDDCVSIGAGSHDVDIRNITCGPSHGISIGSLGIR 238
           LSPNTDGIHIEN+N+V I+NSV+SNGDDCVSIGAG H+VDIRNITCGPSHGISIGSLGI 
Sbjct: 252 LSPNTDGIHIENTNDVHIHNSVVSNGDDCVSIGAGCHNVDIRNITCGPSHGISIGSLGIH 311

Query: 237 NSRACVSNIRVTDSVIKHSTNGLRIKTYQGGSGSVSKVTFNNIHMDTVRNPIIINQFYCE 58
           NSRACVSNI VTDSVIK+S NG+RIKT+QGG GSVSKV F+NIHMDTVRNPIII+Q+YC 
Sbjct: 312 NSRACVSNITVTDSVIKYSDNGVRIKTWQGGYGSVSKVAFHNIHMDTVRNPIIIDQYYCL 371

Query: 57  AKGCANQTSAVFISDIEYS 1
            K C+NQTSAV+ISDI Y+
Sbjct: 372 TKNCSNQTSAVYISDISYT 390


>ref|XP_002330008.1| predicted protein [Populus trichocarpa] gi|222871433|gb|EEF08564.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  233 bits (595), Expect = 9e-60
 Identities = 110/138 (79%), Positives = 128/138 (92%)
 Frame = -3

Query: 414 SPNTDGIHIENSNNVKIYNSVISNGDDCVSIGAGSHDVDIRNITCGPSHGISIGSLGIRN 235
           SPNTDGIHIEN+ NV+I+ SV+SNGDDCVSIGAG H+VDI+NITCGPSHGISIGSLGIRN
Sbjct: 200 SPNTDGIHIENTYNVQIHYSVVSNGDDCVSIGAGCHNVDIKNITCGPSHGISIGSLGIRN 259

Query: 234 SRACVSNIRVTDSVIKHSTNGLRIKTYQGGSGSVSKVTFNNIHMDTVRNPIIINQFYCEA 55
           SRACVSNI VTDSVIK+S NG+RIKT+QGG GSVSK+TF+NIHM+TVRNPIII+Q+YC+ 
Sbjct: 260 SRACVSNITVTDSVIKNSDNGVRIKTWQGGYGSVSKITFHNIHMETVRNPIIIDQYYCQT 319

Query: 54  KGCANQTSAVFISDIEYS 1
           + C NQTSAV+ISDI Y+
Sbjct: 320 RNCTNQTSAVYISDILYT 337


>ref|NP_563654.1| Pectin lyase-like protein [Arabidopsis thaliana]
           gi|9972390|gb|AAG10640.1|AC022521_18 Putative
           polygalacturonase [Arabidopsis thaliana]
           gi|66792702|gb|AAY56453.1| At1g02460 [Arabidopsis
           thaliana] gi|332189311|gb|AEE27432.1| Pectin lyase-like
           protein [Arabidopsis thaliana]
          Length = 491

 Score =  233 bits (594), Expect = 1e-59
 Identities = 113/140 (80%), Positives = 127/140 (90%), Gaps = 1/140 (0%)
 Frame = -3

Query: 420 PLSPNTDGIHIENSNNVKIYNSVISNGDDCVSIGAGSHDVDIRNITCGPS-HGISIGSLG 244
           PLSPNTDGIHIENSN+V IYNS+ISNGDDCVSIG+GS+DVDIRN+TCGP  HGISIGSLG
Sbjct: 268 PLSPNTDGIHIENSNSVTIYNSIISNGDDCVSIGSGSYDVDIRNLTCGPGGHGISIGSLG 327

Query: 243 IRNSRACVSNIRVTDSVIKHSTNGLRIKTYQGGSGSVSKVTFNNIHMDTVRNPIIINQFY 64
             NSRACVSNI V DSVIK+S NG+RIKT+QGGSGSVS VTFNNIH+D+VRNPIII+Q+Y
Sbjct: 328 NHNSRACVSNITVRDSVIKYSDNGVRIKTWQGGSGSVSGVTFNNIHVDSVRNPIIIDQYY 387

Query: 63  CEAKGCANQTSAVFISDIEY 4
           C  K CAN+TSAVF+SDI Y
Sbjct: 388 CMTKDCANKTSAVFVSDIAY 407


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