BLASTX nr result

ID: Bupleurum21_contig00037036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037036
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   175   4e-42
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   175   4e-42
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   175   4e-42
ref|XP_004159272.1| PREDICTED: uncharacterized mitochondrial pro...   174   7e-42
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         173   1e-41

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  175 bits (443), Expect = 4e-42
 Identities = 79/137 (57%), Positives = 110/137 (80%)
 Frame = +1

Query: 1    EEFKLSMMNEFQMSDLGELHHFLGIEVKQSSKGIFISQESYAREILKKFKMEHANPVSTP 180
            EEFK  M  EF+M+D+G + ++LGIEVKQ   GIFI+QE YA+E+LKKFKM+ +NPV TP
Sbjct: 1046 EEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTP 1105

Query: 181  CTVGLSLSKRGEGKLVNPTIYRSLIGNLMYLTSTRPDIMYGVSLLSRFMEKPYSNHWEAA 360
               G+ LSK+ EG+ V+PT ++SL+G+L YLT TRPDI+Y V ++SR+ME P + H++AA
Sbjct: 1106 MECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAA 1165

Query: 361  KRILRYIKGSIEYGIYY 411
            KRILRYIKG++ +G++Y
Sbjct: 1166 KRILRYIKGTVNFGLHY 1182


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  175 bits (443), Expect = 4e-42
 Identities = 79/137 (57%), Positives = 110/137 (80%)
 Frame = +1

Query: 1    EEFKLSMMNEFQMSDLGELHHFLGIEVKQSSKGIFISQESYAREILKKFKMEHANPVSTP 180
            EEFK  M  EF+M+D+G + ++LGIEVKQ   GIFI+QE YA+E+LKKFKM+ +NPV TP
Sbjct: 1014 EEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTP 1073

Query: 181  CTVGLSLSKRGEGKLVNPTIYRSLIGNLMYLTSTRPDIMYGVSLLSRFMEKPYSNHWEAA 360
               G+ LSK+ EG+ V+PT ++SL+G+L YLT TRPDI+Y V ++SR+ME P + H++AA
Sbjct: 1074 MECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAA 1133

Query: 361  KRILRYIKGSIEYGIYY 411
            KRILRYIKG++ +G++Y
Sbjct: 1134 KRILRYIKGTVNFGLHY 1150


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  175 bits (443), Expect = 4e-42
 Identities = 79/137 (57%), Positives = 110/137 (80%)
 Frame = +1

Query: 1    EEFKLSMMNEFQMSDLGELHHFLGIEVKQSSKGIFISQESYAREILKKFKMEHANPVSTP 180
            EEFK  M  EF+M+D+G + ++LGIEVKQ   GIFI+QE YA+E+LKKFKM+ +NPV TP
Sbjct: 1046 EEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTP 1105

Query: 181  CTVGLSLSKRGEGKLVNPTIYRSLIGNLMYLTSTRPDIMYGVSLLSRFMEKPYSNHWEAA 360
               G+ LSK+ EG+ V+PT ++SL+G+L YLT TRPDI+Y V ++SR+ME P + H++AA
Sbjct: 1106 MECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAA 1165

Query: 361  KRILRYIKGSIEYGIYY 411
            KRILRYIKG++ +G++Y
Sbjct: 1166 KRILRYIKGTVNFGLHY 1182


>ref|XP_004159272.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Cucumis sativus]
          Length = 170

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/138 (60%), Positives = 108/138 (78%)
 Frame = +1

Query: 1   EEFKLSMMNEFQMSDLGELHHFLGIEVKQSSKGIFISQESYAREILKKFKMEHANPVSTP 180
           EEF+ SM  EF+M+D+G LH+FLGIEVKQ    I I Q+ YA+++LKKFKME+A P +TP
Sbjct: 4   EEFRESMKKEFEMTDMGLLHYFLGIEVKQGDNEIAIFQKKYAKDLLKKFKMENAYPANTP 63

Query: 181 CTVGLSLSKRGEGKLVNPTIYRSLIGNLMYLTSTRPDIMYGVSLLSRFMEKPYSNHWEAA 360
             +GL LSK    +  + TIYRSL+G+LMYLT+TRPDIM+ VSLLSRFM  P  +HWEA 
Sbjct: 64  MELGLKLSKHDVSEAFDATIYRSLVGSLMYLTTTRPDIMFFVSLLSRFMTSPKRSHWEAG 123

Query: 361 KRILRYIKGSIEYGIYYK 414
           KR+LRYI G++++GI+YK
Sbjct: 124 KRVLRYILGTVDHGIHYK 141


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  173 bits (439), Expect = 1e-41
 Identities = 78/137 (56%), Positives = 110/137 (80%)
 Frame = +1

Query: 1    EEFKLSMMNEFQMSDLGELHHFLGIEVKQSSKGIFISQESYAREILKKFKMEHANPVSTP 180
            EEFK  M  EF+M+D+G + ++LGIEVKQ   GIFI+QE YA+E+LKKFK++ +NPV TP
Sbjct: 1046 EEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTP 1105

Query: 181  CTVGLSLSKRGEGKLVNPTIYRSLIGNLMYLTSTRPDIMYGVSLLSRFMEKPYSNHWEAA 360
               G+ LSK+ EG+ V+PT ++SL+G+L YLT TRPDI+Y V ++SR+ME P + H++AA
Sbjct: 1106 MECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAA 1165

Query: 361  KRILRYIKGSIEYGIYY 411
            KRILRYIKG++ +G++Y
Sbjct: 1166 KRILRYIKGTVNFGLHY 1182


Top