BLASTX nr result

ID: Bupleurum21_contig00037026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037026
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520305.1| ATP binding protein, putative [Ricinus commu...    61   8e-08
emb|CBI18962.3| unnamed protein product [Vitis vinifera]               59   3e-07

>ref|XP_002520305.1| ATP binding protein, putative [Ricinus communis]
           gi|223540524|gb|EEF42091.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 758

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
 Frame = +2

Query: 113 DCSICSPYRHSVHNTCVSSIEESSTD-GDEYISMAIVPVQKPEGSS-----------ELK 256
           +C++C    +S+  +C  S E+SS D G +  S+A+VPV K EG S           ELK
Sbjct: 238 NCTVCGAVGNSLDESCNQSAEKSSGDNGGDNKSLALVPVSKVEGRSSSFRSLIAQVPELK 297

Query: 257 PGWPLLGQTISTHEEVGRSLLPSVKQISVVQWA 355
           PGWPLL + I    +   S   S++QISVVQWA
Sbjct: 298 PGWPLLRRAILPGGQA--SDRSSLRQISVVQWA 328


>emb|CBI18962.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 14/115 (12%)
 Frame = +2

Query: 53  SANSGQTVIKFGSYHEK--SINDCSICSPYRHSVHNTCVSSIEESSTDGD-EYISMAIVP 223
           S +     +  G  +E+  +I D S C      + N+C  SIE SS D   E  S+AIVP
Sbjct: 186 SVSKKSKALNHGKVNEEPSTICDPSACQSLELGL-NSCSQSIEGSSGDSHHEDDSLAIVP 244

Query: 224 VQKPEGSS-----------ELKPGWPLLGQTISTHEEVGRSLLPSVKQISVVQWA 355
           VQK E SS           EL+PGWPLL + I    +   S   SV+QISVVQWA
Sbjct: 245 VQKLEASSSSISLLIRELPELRPGWPLLRRAILPDRQT--STKSSVRQISVVQWA 297


Top