BLASTX nr result

ID: Bupleurum21_contig00037022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037022
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536482.1| PREDICTED: traB domain-containing protein-li...   118   6e-25
ref|XP_004157230.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   115   5e-24
ref|XP_004140793.1| PREDICTED: uncharacterized LOC101219560 [Cuc...   115   5e-24
ref|XP_003592316.1| TraB domain-containing protein [Medicago tru...   112   3e-23
ref|XP_002510844.1| conserved hypothetical protein [Ricinus comm...   112   4e-23

>ref|XP_003536482.1| PREDICTED: traB domain-containing protein-like [Glycine max]
          Length = 371

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/95 (65%), Positives = 66/95 (69%)
 Frame = +2

Query: 2   VELCRSRAGIMYTANDDGNGPKLKSNMFSLSGDGFFGAVGRSINLGGQTAXXXXXXXXXX 181
           VELCRSRAGIMY   +D  G +L+SNMFSLSG GFFGAVGRSINLGGQTA          
Sbjct: 113 VELCRSRAGIMYATANDELGKQLRSNMFSLSGTGFFGAVGRSINLGGQTALALRLLLATF 172

Query: 182 XXXXXXXXXXPFGDEFRVARKTSEEVGAQIVLGDR 286
                     PFGDEFR ARK SEE+GAQIVLGDR
Sbjct: 173 SSKISSDINRPFGDEFRAARKASEEIGAQIVLGDR 207


>ref|XP_004157230.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101219560
           [Cucumis sativus]
          Length = 823

 Score =  115 bits (287), Expect = 5e-24
 Identities = 63/95 (66%), Positives = 64/95 (67%)
 Frame = +2

Query: 2   VELCRSRAGIMYTANDDGNGPKLKSNMFSLSGDGFFGAVGRSINLGGQTAXXXXXXXXXX 181
           VELCRSRAGIMYT +      KLKSNMFSLSGDGF GAV RSINLGGQTA          
Sbjct: 144 VELCRSRAGIMYTLDTGEPDQKLKSNMFSLSGDGFLGAVVRSINLGGQTALALRLLLAVF 203

Query: 182 XXXXXXXXXXPFGDEFRVARKTSEEVGAQIVLGDR 286
                     PFGDEFR ARK SEEVGAQIVLGDR
Sbjct: 204 SSKISSDVNRPFGDEFRAARKASEEVGAQIVLGDR 238


>ref|XP_004140793.1| PREDICTED: uncharacterized LOC101219560 [Cucumis sativus]
          Length = 402

 Score =  115 bits (287), Expect = 5e-24
 Identities = 63/95 (66%), Positives = 64/95 (67%)
 Frame = +2

Query: 2   VELCRSRAGIMYTANDDGNGPKLKSNMFSLSGDGFFGAVGRSINLGGQTAXXXXXXXXXX 181
           VELCRSRAGIMYT +      KLKSNMFSLSGDGF GAV RSINLGGQTA          
Sbjct: 144 VELCRSRAGIMYTLDTGEPDQKLKSNMFSLSGDGFLGAVVRSINLGGQTALALRLLLAVF 203

Query: 182 XXXXXXXXXXPFGDEFRVARKTSEEVGAQIVLGDR 286
                     PFGDEFR ARK SEEVGAQIVLGDR
Sbjct: 204 SSKISSDVNRPFGDEFRAARKASEEVGAQIVLGDR 238


>ref|XP_003592316.1| TraB domain-containing protein [Medicago truncatula]
           gi|355481364|gb|AES62567.1| TraB domain-containing
           protein [Medicago truncatula]
          Length = 380

 Score =  112 bits (280), Expect = 3e-23
 Identities = 61/95 (64%), Positives = 66/95 (69%)
 Frame = +2

Query: 2   VELCRSRAGIMYTANDDGNGPKLKSNMFSLSGDGFFGAVGRSINLGGQTAXXXXXXXXXX 181
           VELCRSRAGIMY A+DD    +L+S MFSLSG GFFGA+GRSINLGGQTA          
Sbjct: 123 VELCRSRAGIMY-ADDDQLDKQLRSTMFSLSGTGFFGAIGRSINLGGQTALALRLLLAAF 181

Query: 182 XXXXXXXXXXPFGDEFRVARKTSEEVGAQIVLGDR 286
                     PFGDEFR ARK SEEVGAQ+VLGDR
Sbjct: 182 SSKISSNIDRPFGDEFRAARKVSEEVGAQLVLGDR 216


>ref|XP_002510844.1| conserved hypothetical protein [Ricinus communis]
           gi|223549959|gb|EEF51446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 390

 Score =  112 bits (279), Expect = 4e-23
 Identities = 62/108 (57%), Positives = 69/108 (63%), Gaps = 13/108 (12%)
 Frame = +2

Query: 2   VELCRSR-------------AGIMYTANDDGNGPKLKSNMFSLSGDGFFGAVGRSINLGG 142
           VELCRSR             AGIMYT+N+  +  +L+SNMFSLSG+GFFGAVGRSINLGG
Sbjct: 122 VELCRSRQVLFLFMLIYKIKAGIMYTSNEGEDNQQLRSNMFSLSGNGFFGAVGRSINLGG 181

Query: 143 QTAXXXXXXXXXXXXXXXXXXXXPFGDEFRVARKTSEEVGAQIVLGDR 286
           QTA                    PFGDEFR ARK SEE+GAQIVLGDR
Sbjct: 182 QTALALRLLLALFSSKISNDVNRPFGDEFRAARKVSEEIGAQIVLGDR 229


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