BLASTX nr result

ID: Bupleurum21_contig00037020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037020
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297990.1| multidrug resistance protein ABC transporter...   147   1e-33
ref|XP_002271761.2| PREDICTED: ABC transporter C family member 1...   145   3e-33
ref|XP_003631374.1| PREDICTED: ABC transporter C family member 1...   142   2e-32
emb|CAN82344.1| hypothetical protein VITISV_044174 [Vitis vinifera]   140   8e-32
ref|XP_002271828.2| PREDICTED: ABC transporter C family member 1...   140   1e-31

>ref|XP_002297990.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222845248|gb|EEE82795.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1446

 Score =  147 bits (370), Expect = 1e-33
 Identities = 74/132 (56%), Positives = 97/132 (73%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   WLSAVLSLRGYYIALFWSSTIVITIVTFWACYLMNIPLDASDAFTLLATVRIVQEPIRLI 182
           W+S VL  +GY++ LFWSS +++  +TFWACYL+ IP+ AS  FT LA +RIVQEPIRLI
Sbjct: 494 WISGVLWQKGYHMVLFWSSPVMVPAITFWACYLLGIPVSASSVFTFLACLRIVQEPIRLI 553

Query: 183 PDVAGIFIEAKVALTRIVKFLEEDELQKRSVES--NCKDTEKSIQIKEASVSWDI-SSTK 353
           PDVAG+FIEAKV+L RIVKFLE  EL+        N K+ ++SI I+   +SW I SS+K
Sbjct: 554 PDVAGVFIEAKVSLDRIVKFLEAPELRNSITRQKLNGKELDQSILIRTTEISWGIDSSSK 613

Query: 354 ATLEDIYLDIKP 389
           ATL +I + +KP
Sbjct: 614 ATLRNINVVVKP 625


>ref|XP_002271761.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1491

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/131 (54%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
 Frame = +3

Query: 3   WLSAVLSLRGYYIALFWSSTIVITIVTFWACYLMNIPLDASDAFTLLATVRIVQEPIRLI 182
           WLS+VLS RGY + LFWSS IV++ VTFWACY +   L A++ FT +A++R+ QEPIRLI
Sbjct: 528 WLSSVLSQRGYNLILFWSSPIVVSAVTFWACYFLGTTLSATNVFTFMASLRLAQEPIRLI 587

Query: 183 PDVAGIFIEAKVALTRIVKFLEEDELQKRSVESNC--KDTEKSIQIKEASVSWDISSTKA 356
           PDV   FIEAKV+L RI KFL+  ELQ + V   C  K+ E+SI IK   +SW+ ++T+A
Sbjct: 588 PDVISAFIEAKVSLDRIAKFLDAPELQNKHVRKMCDGKELEESIFIKSNRISWEDNTTRA 647

Query: 357 TLEDIYLDIKP 389
           TL +I L +KP
Sbjct: 648 TLRNITLVVKP 658


>ref|XP_003631374.1| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1480

 Score =  142 bits (359), Expect = 2e-32
 Identities = 71/131 (54%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
 Frame = +3

Query: 3   WLSAVLSLRGYYIALFWSSTIVITIVTFWACYLMNIPLDASDAFTLLATVRIVQEPIRLI 182
           WLS+VLS RGY + L+WS  IV+++V FWACY +   L A++ FT +A++RI QEPIRLI
Sbjct: 519 WLSSVLSQRGYSLILWWSFPIVVSVVAFWACYFLGTTLSATNVFTFMASLRIAQEPIRLI 578

Query: 183 PDVAGIFIEAKVALTRIVKFLEEDELQKRSVESNC--KDTEKSIQIKEASVSWDISSTKA 356
           PDV   FIEAKV+L RI KFL+  ELQ + V   C  K+ E+SI IK   +SW+ +ST+A
Sbjct: 579 PDVISAFIEAKVSLDRIAKFLDAPELQNKHVRRMCDGKELEESIFIKSNRISWEDNSTRA 638

Query: 357 TLEDIYLDIKP 389
           TL +I L +KP
Sbjct: 639 TLRNINLVVKP 649


>emb|CAN82344.1| hypothetical protein VITISV_044174 [Vitis vinifera]
          Length = 1244

 Score =  140 bits (354), Expect = 8e-32
 Identities = 71/131 (54%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
 Frame = +3

Query: 3   WLSAVLSLRGYYIALFWSSTIVITIVTFWACYLMNIPLDASDAFTLLATVRIVQEPIRLI 182
           WLS+VLS RGY + L+WS  IV++ V FWACY +   L A++ FT +A++RI QEPIRLI
Sbjct: 451 WLSSVLSQRGYSLILWWSFPIVVSXVXFWACYFLGTTLSATNVFTFMASLRIAQEPIRLI 510

Query: 183 PDVAGIFIEAKVALTRIVKFLEEDELQKRSVESNC--KDTEKSIQIKEASVSWDISSTKA 356
           PDV   FIEAKV+L RI KFL+  ELQ + V   C  K+ E+SI IK   +SW+ +ST+A
Sbjct: 511 PDVISAFIEAKVSLDRIAKFLDAPELQNKHVRXMCDGKELEESIFIKSNRISWEDNSTRA 570

Query: 357 TLEDIYLDIKP 389
           TL +I L +KP
Sbjct: 571 TLRNINLVVKP 581


>ref|XP_002271828.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1488

 Score =  140 bits (352), Expect = 1e-31
 Identities = 74/130 (56%), Positives = 93/130 (71%), Gaps = 2/130 (1%)
 Frame = +3

Query: 3   WLSAVLSLRGYYIALFWSSTIVITIVTFWACYLMNIPLDASDAFTLLATVRIVQEPIRLI 182
           WLSAVL  R   + LFWS  ++ +  TFWACY + IPL AS AFT LA++RIVQEPIRLI
Sbjct: 528 WLSAVLMKRAQKLVLFWSCPVLGSAATFWACYFLGIPLTASSAFTFLASLRIVQEPIRLI 587

Query: 183 PDVAGIFIEAKVALTRIVKFLEEDELQKRSVES--NCKDTEKSIQIKEASVSWDISSTKA 356
           P+V   FIEAKV+LTRIVKFLE  E+  R V+   + K+ E+SI IK   +SWD +ST+A
Sbjct: 588 PEVVSAFIEAKVSLTRIVKFLEAPEVDGRHVKKMFDGKELEESIFIKADRISWDNNSTRA 647

Query: 357 TLEDIYLDIK 386
           TL +I L +K
Sbjct: 648 TLRNINLVVK 657


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