BLASTX nr result

ID: Bupleurum21_contig00037006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037006
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indi...   121   5e-26
ref|XP_002463339.1| hypothetical protein SORBIDRAFT_02g042016 [S...   120   2e-25
gb|AAK54302.1|AC034258_20 putative helicase [Oryza sativa Japoni...   119   3e-25
ref|XP_002439987.1| hypothetical protein SORBIDRAFT_09g023900 [S...   117   1e-24
gb|AAK54292.1|AC034258_10 putative helicase [Oryza sativa Japoni...   116   2e-24

>gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indica Group]
          Length = 937

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/130 (44%), Positives = 86/130 (66%)
 Frame = -3

Query: 391  KYLSERAILSPTNEIVGHVNALLVERIDSELHTYCSVDSAEGFGGGAEELNFSFPVEYLN 212
            ++L ERAI+ P NE V  +N  ++ +I  E  TY S D+         ++   +P E+LN
Sbjct: 720  EFLEERAIMCPRNETVDEINKYIMSQIQGEEVTYLSCDTVCRATTNNSDMEDMYPTEFLN 779

Query: 211  SINIPGIPCHELRLKVGVAVMLIRNLNQALGLCNGTRMAVTKCLPKCVECVVLSGNYVGS 32
            S++ PGIP HEL+LKVG+ +ML+RN+NQA GLCNGTRM +T+   K +E  +++G  VG 
Sbjct: 780  SLSFPGIPNHELKLKVGLPIMLLRNINQAAGLCNGTRMTITQLGQKYIEAQIITGTNVGD 839

Query: 31   KHFIPRMKIS 2
            K +IPR+ +S
Sbjct: 840  KVYIPRIIMS 849


>ref|XP_002463339.1| hypothetical protein SORBIDRAFT_02g042016 [Sorghum bicolor]
            gi|241926716|gb|EER99860.1| hypothetical protein
            SORBIDRAFT_02g042016 [Sorghum bicolor]
          Length = 1261

 Score =  120 bits (300), Expect = 2e-25
 Identities = 56/131 (42%), Positives = 83/131 (63%)
 Frame = -3

Query: 394  SKYLSERAILSPTNEIVGHVNALLVERIDSELHTYCSVDSAEGFGGGAEELNFSFPVEYL 215
            + YL ERAIL+ TNEIV  +N+ ++  +  E+  Y S DS         + N  +P+EYL
Sbjct: 1113 ASYLKERAILTTTNEIVDDINSYILTLVPGEVKEYYSADSISKCFETCNDANILYPIEYL 1172

Query: 214  NSINIPGIPCHELRLKVGVAVMLIRNLNQALGLCNGTRMAVTKCLPKCVECVVLSGNYVG 35
            NS+N    P H L LK+GV +ML+RN+NQ +GLCNGTRM VT      +E ++++G+ +G
Sbjct: 1173 NSLNANNFPQHNLTLKIGVPIMLLRNINQTIGLCNGTRMIVTNLGDNVIEALIITGSNIG 1232

Query: 34   SKHFIPRMKIS 2
             K  IPR+ ++
Sbjct: 1233 HKVLIPRINLT 1243


>gb|AAK54302.1|AC034258_20 putative helicase [Oryza sativa Japonica Group]
            gi|31432486|gb|AAP54108.1| AT hook motif-containing
            protein, putative [Oryza sativa Japonica Group]
          Length = 1573

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/130 (43%), Positives = 86/130 (66%)
 Frame = -3

Query: 391  KYLSERAILSPTNEIVGHVNALLVERIDSELHTYCSVDSAEGFGGGAEELNFSFPVEYLN 212
            KYL ERAIL PTN+ V  +N  ++++I  +  TY S DS       + E+   +P E+LN
Sbjct: 1356 KYLEERAILCPTNDDVNELNEYIMDQIQGDKVTYLSHDSVSKSMSYSHEMEMLYPTEFLN 1415

Query: 211  SINIPGIPCHELRLKVGVAVMLIRNLNQALGLCNGTRMAVTKCLPKCVECVVLSGNYVGS 32
            S+  PGIP H+L+LKVG+ VML+RN+NQ  GLCNGTRM +T+   + +E  +++G ++G 
Sbjct: 1416 SLKHPGIPNHQLKLKVGLPVMLLRNINQNAGLCNGTRMRITRFGKRVIEAEIITGTHIGD 1475

Query: 31   KHFIPRMKIS 2
               IP++ +S
Sbjct: 1476 MVCIPQIIMS 1485


>ref|XP_002439987.1| hypothetical protein SORBIDRAFT_09g023900 [Sorghum bicolor]
           gi|241945272|gb|EES18417.1| hypothetical protein
           SORBIDRAFT_09g023900 [Sorghum bicolor]
          Length = 301

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/130 (42%), Positives = 83/130 (63%)
 Frame = -3

Query: 391 KYLSERAILSPTNEIVGHVNALLVERIDSELHTYCSVDSAEGFGGGAEELNFSFPVEYLN 212
           +YL  RAIL+ TNEIV  +N  ++  +      Y S DS         + +  +P+EYLN
Sbjct: 82  EYLKNRAILATTNEIVDEINEYMLNLLPGNEVEYYSADSISKCTDTCNDADILYPIEYLN 141

Query: 211 SINIPGIPCHELRLKVGVAVMLIRNLNQALGLCNGTRMAVTKCLPKCVECVVLSGNYVGS 32
           S++    P H+L+LK+GV VML+RNLNQ++GLCNGTR+ VT      VE ++++G +VG 
Sbjct: 142 SLSANNFPTHKLKLKIGVPVMLLRNLNQSIGLCNGTRLIVTNLGQNVVEAIIITGTHVGE 201

Query: 31  KHFIPRMKIS 2
           K +IPR+ ++
Sbjct: 202 KVYIPRINLT 211


>gb|AAK54292.1|AC034258_10 putative helicase [Oryza sativa Japonica Group]
          Length = 1501

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/129 (44%), Positives = 84/129 (65%)
 Frame = -3

Query: 388  YLSERAILSPTNEIVGHVNALLVERIDSELHTYCSVDSAEGFGGGAEELNFSFPVEYLNS 209
            YL ERAIL P NE V  +N  ++++I  +  TY S DS       + E+   +P E+LNS
Sbjct: 1285 YLEERAILCPVNENVNELNEYIMDQIQGDKVTYLSRDSVSKSVSYSHEMEMLYPTEFLNS 1344

Query: 208  INIPGIPCHELRLKVGVAVMLIRNLNQALGLCNGTRMAVTKCLPKCVECVVLSGNYVGSK 29
            +N  GIP H+L+LKVG+ VML+RN+NQ+ GLCNGTRM +T+   K +E  +++G + G  
Sbjct: 1345 LNHSGIPNHQLKLKVGLPVMLLRNINQSAGLCNGTRMTITRLGNKVIEAQIITGTHSGDM 1404

Query: 28   HFIPRMKIS 2
              IP++ +S
Sbjct: 1405 VCIPQIIMS 1413


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