BLASTX nr result

ID: Bupleurum21_contig00036975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036975
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis...   188   4e-46
ref|XP_002322095.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
emb|CAA98182.1| RAB11F [Lotus japonicus]                              179   3e-43
gb|ACU23574.1| unknown [Glycine max]                                  177   1e-42
ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [...   176   1e-42

>ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
           gi|297734313|emb|CBI15560.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score =  188 bits (477), Expect = 4e-46
 Identities = 94/119 (78%), Positives = 107/119 (89%)
 Frame = +3

Query: 3   DTAGQERFRAITSSYYRGALGALLVYDITRKDTFESLKKWLHELREFGKSDMVIVLVGNK 182
           DTAGQERFRAITSSYYRGALGALLVYDITR+ TFE+LKKWL ELR+FGK DMVIVLVGNK
Sbjct: 68  DTAGQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIVLVGNK 127

Query: 183 SDLSESRQVVMEDAQSLAQLEGLCFMETSAKENLNVEEAFLNMINKIYEISSQKSLETK 359
           SDL  SR+V  E+ ++LA+ EGLCFMETSA ENLNVEEAFL+MI KI+E++SQK+LE K
Sbjct: 128 SDLGHSREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQKNLEAK 186


>ref|XP_002322095.1| predicted protein [Populus trichocarpa] gi|222869091|gb|EEF06222.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/119 (74%), Positives = 105/119 (88%)
 Frame = +3

Query: 3   DTAGQERFRAITSSYYRGALGALLVYDITRKDTFESLKKWLHELREFGKSDMVIVLVGNK 182
           DTAGQERFRAITSSYYRGALGALLVYDITR+ TF+++KKWLHELR+FG SDMV+VLVGNK
Sbjct: 67  DTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVVVLVGNK 126

Query: 183 SDLSESRQVVMEDAQSLAQLEGLCFMETSAKENLNVEEAFLNMINKIYEISSQKSLETK 359
           SD+S  R+V  +D ++LA+ E L FMETSA ENLNVEEAF+ MI +I+EI+SQKSLE K
Sbjct: 127 SDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQKSLEAK 185


>emb|CAA98182.1| RAB11F [Lotus japonicus]
          Length = 218

 Score =  179 bits (453), Expect = 3e-43
 Identities = 88/119 (73%), Positives = 102/119 (85%)
 Frame = +3

Query: 3   DTAGQERFRAITSSYYRGALGALLVYDITRKDTFESLKKWLHELREFGKSDMVIVLVGNK 182
           DTAGQERFRAITSSYYRGALG +LVYDITR+ TF ++ KWLHELREFG  DMV+VLV NK
Sbjct: 68  DTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMVVVLVANK 127

Query: 183 SDLSESRQVVMEDAQSLAQLEGLCFMETSAKENLNVEEAFLNMINKIYEISSQKSLETK 359
           SDL +SR+V  E+ +  A++EGLCFMETSA +NLNVEEAFL MI KI++I SQKSLETK
Sbjct: 128 SDLVQSREVEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQKSLETK 186


>gb|ACU23574.1| unknown [Glycine max]
          Length = 218

 Score =  177 bits (448), Expect = 1e-42
 Identities = 88/119 (73%), Positives = 103/119 (86%)
 Frame = +3

Query: 3   DTAGQERFRAITSSYYRGALGALLVYDITRKDTFESLKKWLHELREFGKSDMVIVLVGNK 182
           DTAGQERFRAITSSYYRGALGA+LVYDIT++ TF ++ KWLHELREFG  DMV+VLVGNK
Sbjct: 69  DTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGNK 128

Query: 183 SDLSESRQVVMEDAQSLAQLEGLCFMETSAKENLNVEEAFLNMINKIYEISSQKSLETK 359
           SDL +SRQV  E+ + +A+ E LCFMETSA +NLNV+EAFL MI KI++I SQKSLETK
Sbjct: 129 SDLDQSRQVEREEGKVVAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLETK 187


>ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
          Length = 218

 Score =  176 bits (447), Expect = 1e-42
 Identities = 88/119 (73%), Positives = 102/119 (85%)
 Frame = +3

Query: 3   DTAGQERFRAITSSYYRGALGALLVYDITRKDTFESLKKWLHELREFGKSDMVIVLVGNK 182
           DTAGQERFRAITSSYYRGALGA+LVYDIT++ TF ++ KWLHELREFG  DMV+VLVGNK
Sbjct: 69  DTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGNK 128

Query: 183 SDLSESRQVVMEDAQSLAQLEGLCFMETSAKENLNVEEAFLNMINKIYEISSQKSLETK 359
           SDL +SRQV  E+ +  A+ E LCFMETSA +NLNV+EAFL MI KI++I SQKSLETK
Sbjct: 129 SDLDQSRQVEREEGKVFAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLETK 187


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