BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036967
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   148   5e-34
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]   139   2e-31
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   138   5e-31
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   130   1e-28
gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold ...   129   2e-28

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/149 (48%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
 Frame = +3

Query: 6   ISWMSWDRMSRSKEAGGLGFRSIRDFNLAMLGKQGWRFLSNPDSLVTRVYKAHYFKDGDF 185
           I WMSW +M + K+ GGLGFR + DFNLA+L KQGWRFL NPDSLVTR+++A YF++  F
Sbjct: 304 IRWMSWGKMCKQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSF 363

Query: 186 LSAVLGKNPSFIWRSVHAAQDLVRQGARKGIGDGETVSITKDPWFPDVANPK-VTSNHPG 362
           L+A LG NPS++WRS+ AAQ L+++G    I  G  V +  D W PD +N   +T    G
Sbjct: 364 LNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTKVQVWGDSWLPDSSNRLIITPPVAG 423

Query: 363 LAGALVSSLFVMGEKVWDVDIVKDMFNER 449
             G  V  L   G  +W  D ++D F  R
Sbjct: 424 FDGIKVDELITEG--LWREDFIRDKFMAR 450


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score =  139 bits (350), Expect = 2e-31
 Identities = 60/114 (52%), Positives = 84/114 (73%)
 Frame = +3

Query: 3   RISWMSWDRMSRSKEAGGLGFRSIRDFNLAMLGKQGWRFLSNPDSLVTRVYKAHYFKDGD 182
           RI+W+SWD++   KE GGLGFR+ RDFNLAMLGKQGW  ++ PDSL+ R+ KA Y++ GD
Sbjct: 356 RINWLSWDKLCLRKEEGGLGFRNXRDFNLAMLGKQGWNLITKPDSLIARLLKARYYRSGD 415

Query: 183 FLSAVLGKNPSFIWRSVHAAQDLVRQGARKGIGDGETVSITKDPWFPDVANPKV 344
           FLSA LG NPSF W+ + +++ ++ +G+R  IGDG ++ +  +PW  D  N KV
Sbjct: 416 FLSARLGHNPSFTWKGIWSSRAILLKGSRWRIGDGCSIDVWNNPWLRDAENFKV 469


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/149 (45%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
 Frame = +3

Query: 6    ISWMSWDRMSRSKEAGGLGFRSIRDFNLAMLGKQGWRFLSNPDSLVTRVYKAHYFKDGDF 185
            I WMSW +M + K+ GGLGFR + DFNLA+L KQG RFL N DSLVT +++A YF++  F
Sbjct: 1391 IRWMSWXKMCKQKKDGGLGFRKLEDFNLALLAKQGXRFLQNLDSLVTIIFQARYFRNSSF 1450

Query: 186  LSAVLGKNPSFIWRSVHAAQDLVRQGARKGIGDGETVSITKDPWFPDVANPKVTSNH-PG 362
            L+A LG NPS++WRS+ AAQDL++ G    I  G  V +  D W P+ +N  + + H   
Sbjct: 1451 LNAELGSNPSYMWRSILAAQDLLKMGCYWSIASGTKVQVWGDSWLPNSSNRLIITPHVAD 1510

Query: 363  LAGALVSSLFVMGEKVWDVDIVKDMFNER 449
              G  V  L   G  +W  D ++D F  R
Sbjct: 1511 FDGIKVDELITKG--LWHEDFIRDKFMGR 1537


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/148 (43%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
 Frame = +3

Query: 6   ISWMSWDRMSRSKEAGGLGFRSIRDFNLAMLGKQGWRFLSNPDSLVTRVYKAHYFKDGDF 185
           I+WM WD ++  K  GGLGFR++  FNL+MLGKQGW+ LS+  SL TR+ KA YF   DF
Sbjct: 368 INWMRWDFLTLHKSLGGLGFRNLEAFNLSMLGKQGWKLLSDSSSLFTRILKAKYFPRRDF 427

Query: 186 LSAVLGKNPSFIWRSVHAAQDLVRQGARKGIGDGETVSITKDPWFPDVANPKVTSNHPGL 365
           L A LG NPS+ WRS+ + Q L+  G R  IGDG  +++   PW  ++ + K +++ P  
Sbjct: 428 LDATLGHNPSYTWRSLWSTQSLLTLGHRWKIGDGSKINVWSMPWIRNLLSLKPSTSPPLH 487

Query: 366 AGAL-VSSLFVMGEKVWDVDIVKDMFNE 446
              L V+SL       WD  +V+ +FN+
Sbjct: 488 QHDLTVNSLLSADFNSWDTTLVQSLFND 515


>gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 380

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/145 (41%), Positives = 90/145 (62%), Gaps = 1/145 (0%)
 Frame = +3

Query: 12  WMSWDRMSRSKEAGGLGFRSIRDFNLAMLGKQGWRFLSNPDSLVTRVYKAHYFKDGDFLS 191
           +  W+R+S  K  GG+GF+S+R FNLAM+GKQ W+ +SNPDSL+T++ KA YF   D+ S
Sbjct: 2   YFPWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSDYFS 61

Query: 192 AVLGKNPSFIWRSVHAAQDLVRQGARKGIGDGETVSITKDPWFPD-VANPKVTSNHPGLA 368
           A +G NPS++WRS+ + +D ++ G +  IG GET+S+   PW  D +    VT       
Sbjct: 62  ASIGHNPSYVWRSLWSVRDYLKHGLKWSIGMGETISVWNQPWLKDPLCLQPVTEVQIMWD 121

Query: 369 GALVSSLFVMGEKVWDVDIVKDMFN 443
              V  LF    K W+ + ++ +FN
Sbjct: 122 ALTVGHLFKPNTKEWNENFIRYVFN 146