BLASTX nr result

ID: Bupleurum21_contig00036952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036952
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   139   2e-31
emb|CBI22055.3| unnamed protein product [Vitis vinifera]              139   2e-31
emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]   137   7e-31
ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002870268.1| hypothetical protein ARALYDRAFT_915332 [Arab...   114   6e-24

>ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group D2
           protein-like [Vitis vinifera]
          Length = 1069

 Score =  139 bits (351), Expect = 2e-31
 Identities = 72/115 (62%), Positives = 89/115 (77%)
 Frame = -2

Query: 347 TVRSEFLSGFVSYVGSTDNLRRILLPTNGDNCGSARTESLVRVLLLVPSIQLDIQNILLE 168
           ++RS FLSGF  YV S+ NL R+LLP+N D  G A  ESLVR LLLVP IQLD+QN+LLE
Sbjct: 108 SIRSAFLSGFSFYVQSSQNLHRVLLPSNRDGLGPATCESLVRHLLLVPPIQLDLQNMLLE 167

Query: 167 KMPEYFDAQPVSGNGACSLRLDEDIARLILNQFRWLDFLINSEAFTDKLLEILSI 3
           K+PEYFD  P     + S  LDED+ARLI+N FRWLDFL++S AFT+KL+++LSI
Sbjct: 168 KLPEYFDINPEYFGRSSS--LDEDVARLIVNHFRWLDFLVDSYAFTNKLMQVLSI 220


>emb|CBI22055.3| unnamed protein product [Vitis vinifera]
          Length = 1507

 Score =  139 bits (351), Expect = 2e-31
 Identities = 72/115 (62%), Positives = 89/115 (77%)
 Frame = -2

Query: 347 TVRSEFLSGFVSYVGSTDNLRRILLPTNGDNCGSARTESLVRVLLLVPSIQLDIQNILLE 168
           ++RS FLSGF  YV S+ NL R+LLP+N D  G A  ESLVR LLLVP IQLD+QN+LLE
Sbjct: 108 SIRSAFLSGFSFYVQSSQNLHRVLLPSNRDGLGPATCESLVRHLLLVPPIQLDLQNMLLE 167

Query: 167 KMPEYFDAQPVSGNGACSLRLDEDIARLILNQFRWLDFLINSEAFTDKLLEILSI 3
           K+PEYFD  P     + S  LDED+ARLI+N FRWLDFL++S AFT+KL+++LSI
Sbjct: 168 KLPEYFDINPEYFGRSSS--LDEDVARLIVNHFRWLDFLVDSYAFTNKLMQVLSI 220


>emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]
          Length = 1201

 Score =  137 bits (346), Expect = 7e-31
 Identities = 70/115 (60%), Positives = 89/115 (77%)
 Frame = -2

Query: 347 TVRSEFLSGFVSYVGSTDNLRRILLPTNGDNCGSARTESLVRVLLLVPSIQLDIQNILLE 168
           ++RS FLSGF  YV S+ NL R+LLP+N D  G A  ESLVR LLLVP IQLD+QN+LLE
Sbjct: 43  SJRSAFLSGFSFYVQSSQNLHRVLLPSNRDGLGPATXESLVRHLLLVPPIQLDLQNMLLE 102

Query: 167 KMPEYFDAQPVSGNGACSLRLDEDIARLILNQFRWLDFLINSEAFTDKLLEILSI 3
           K+PEYFD  P     + S  LDED+ARLI+N FRWLDFL++S AFT+KL+++++I
Sbjct: 103 KLPEYFDINPEYXGRSSS--LDEDVARLIVNHFRWLDFLVDSYAFTNKLMQVVTI 155


>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
           predicted protein [Populus trichocarpa]
          Length = 1476

 Score =  130 bits (326), Expect = 1e-28
 Identities = 64/116 (55%), Positives = 88/116 (75%)
 Frame = -2

Query: 350 PTVRSEFLSGFVSYVGSTDNLRRILLPTNGDNCGSARTESLVRVLLLVPSIQLDIQNILL 171
           P +RS+FLSGF SY+    N RR+L  +  D  G+ R+ESLVR LLLVP+IQLD+Q +LL
Sbjct: 104 PALRSDFLSGFSSYINLQHNFRRVLAFSKRDGFGAKRSESLVRQLLLVPAIQLDLQIMLL 163

Query: 170 EKMPEYFDAQPVSGNGACSLRLDEDIARLILNQFRWLDFLINSEAFTDKLLEILSI 3
           EK+PEYFD   V  +   +L L++D+ARLI++QFRWLDF+++   FTDKLL+++SI
Sbjct: 164 EKLPEYFDTNSV--DSRTTLSLEDDVARLIIDQFRWLDFVVDPNTFTDKLLQVVSI 217


>ref|XP_002870268.1| hypothetical protein ARALYDRAFT_915332 [Arabidopsis lyrata subsp.
           lyrata] gi|297316104|gb|EFH46527.1| hypothetical protein
           ARALYDRAFT_915332 [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/114 (56%), Positives = 83/114 (72%)
 Frame = -2

Query: 344 VRSEFLSGFVSYVGSTDNLRRILLPTNGDNCGSARTESLVRVLLLVPSIQLDIQNILLEK 165
           +RS F++GF SY+ S  NLRR+L   +  +  + R ESL R LLLV  IQLDIQ +LLEK
Sbjct: 93  LRSVFVAGFSSYIQSPSNLRRVL---SSSSSTTNRDESLARNLLLVSPIQLDIQEMLLEK 149

Query: 164 MPEYFDAQPVSGNGACSLRLDEDIARLILNQFRWLDFLINSEAFTDKLLEILSI 3
           +PEYFD   V+G   CSL  +ED+ARLI+N FRWLDF++N   FTDKL+++LSI
Sbjct: 150 LPEYFDV--VTG---CSL--EEDVARLIINHFRWLDFIVNPNLFTDKLMQVLSI 196


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