BLASTX nr result

ID: Bupleurum21_contig00036949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036949
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867478.1| hypothetical protein ARALYDRAFT_913731 [Arab...   133   2e-29
ref|NP_194524.2| ethylene-responsive transcription factor CRF4 [...   132   6e-29
emb|CAB36764.1| putative protein [Arabidopsis thaliana] gi|72696...   132   6e-29
ref|XP_004149454.1| PREDICTED: ethylene-responsive transcription...   131   1e-28
ref|XP_002267400.1| PREDICTED: ethylene-responsive transcription...   129   3e-28

>ref|XP_002867478.1| hypothetical protein ARALYDRAFT_913731 [Arabidopsis lyrata subsp.
           lyrata] gi|297313314|gb|EFH43737.1| hypothetical protein
           ARALYDRAFT_913731 [Arabidopsis lyrata subsp. lyrata]
          Length = 335

 Score =  133 bits (335), Expect = 2e-29
 Identities = 81/213 (38%), Positives = 118/213 (55%), Gaps = 12/213 (5%)
 Frame = -3

Query: 608 DVPPVKFKVHRSFTSKQLSSTLPNRGIS--ESSRVVRICVXXXXXXXXXXXXXDQKDYMI 435
           D+ PVK+  H++   K    +   +  S  +S+R+VR+ +              +++++ 
Sbjct: 8   DLRPVKYTEHKTVIRKYTKKSSLEKKTSGRDSARLVRVSMTDRDATDSSSD---EEEFLF 64

Query: 434 RRKINKKYISEIKIEPLSEKSPEKRNGVVKKKKIEGPTKKNDKNMVPQNYPKYRGVRCRP 255
            R+  K+ I+EI++EP S       + +  +K++   +     ++  QN  KYRGVR RP
Sbjct: 65  PRRRVKRLINEIRLEPSSSSGDVSASPMKDRKRLTVDSTVQKPSVSGQNQKKYRGVRQRP 124

Query: 254 WGKWAAEIRDRSQGGRIWLGTYDTAEEAAVVYDKAAIKIRGANALTNFLKIPAPENIP-- 81
           WGKWAAEIRD  Q  RIWLGT+ TAEEAAVVYD AAIK+RG +ALTNF   P PE  P  
Sbjct: 125 WGKWAAEIRDPEQRRRIWLGTFATAEEAAVVYDNAAIKLRGPDALTNFTVPPEPEPEPEP 184

Query: 80  -PAETPEEVSKLEEYEA-------ESPTSVFRF 6
            P + PE    +   E+        SPTSV ++
Sbjct: 185 EPEQEPESNMSVSISESMDDSQHLSSPTSVLKY 217


>ref|NP_194524.2| ethylene-responsive transcription factor CRF4 [Arabidopsis
           thaliana] gi|334302779|sp|Q9SUE3.2|CRF4_ARATH RecName:
           Full=Ethylene-responsive transcription factor CRF4;
           AltName: Full=Protein CYTOKININ RESPONSE FACTOR 4
           gi|192571732|gb|ACF04811.1| At4g27950 [Arabidopsis
           thaliana] gi|332660012|gb|AEE85412.1|
           ethylene-responsive transcription factor CRF4
           [Arabidopsis thaliana]
          Length = 335

 Score =  132 bits (331), Expect = 6e-29
 Identities = 80/212 (37%), Positives = 115/212 (54%), Gaps = 11/212 (5%)
 Frame = -3

Query: 608 DVPPVKFKVHRSFTSKQLSSTLPNR--GISESSRVVRICVXXXXXXXXXXXXXDQKDYMI 435
           D+ PVK+  H++   K    +   R   + +S+R+VR+ +              +++++ 
Sbjct: 8   DLRPVKYTEHKTVIRKYTKKSSMERKTSVRDSARLVRVSMTDRDATDSSSD---EEEFLF 64

Query: 434 RRKINKKYISEIKIEPLSEKSPEKRNGVVK-KKKIEGPTKKNDKNMVPQNYPKYRGVRCR 258
            R+  K+ I+EI++EP S  + +      K +K+I   +     ++  QN  KYRGVR R
Sbjct: 65  PRRRVKRLINEIRVEPSSSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQR 124

Query: 257 PWGKWAAEIRDRSQGGRIWLGTYDTAEEAAVVYDKAAIKIRGANALTNFLKIPAPENIPP 78
           PWGKWAAEIRD  Q  RIWLGT+ TAEEAA+VYD AAIK+RG +ALTNF   P PE +  
Sbjct: 125 PWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPEPVQE 184

Query: 77  AETPEE--------VSKLEEYEAESPTSVFRF 6
            E   E         S  +     SPTSV  +
Sbjct: 185 QEQEPESNMSVSISESMDDSQHLSSPTSVLNY 216


>emb|CAB36764.1| putative protein [Arabidopsis thaliana] gi|7269649|emb|CAB79597.1|
           putative protein [Arabidopsis thaliana]
           gi|48479336|gb|AAT44939.1| putative AP2/EREBP
           transcription factor [Arabidopsis thaliana]
          Length = 334

 Score =  132 bits (331), Expect = 6e-29
 Identities = 80/212 (37%), Positives = 115/212 (54%), Gaps = 11/212 (5%)
 Frame = -3

Query: 608 DVPPVKFKVHRSFTSKQLSSTLPNR--GISESSRVVRICVXXXXXXXXXXXXXDQKDYMI 435
           D+ PVK+  H++   K    +   R   + +S+R+VR+ +              +++++ 
Sbjct: 7   DLRPVKYTEHKTVIRKYTKKSSMERKTSVRDSARLVRVSMTDRDATDSSSD---EEEFLF 63

Query: 434 RRKINKKYISEIKIEPLSEKSPEKRNGVVK-KKKIEGPTKKNDKNMVPQNYPKYRGVRCR 258
            R+  K+ I+EI++EP S  + +      K +K+I   +     ++  QN  KYRGVR R
Sbjct: 64  PRRRVKRLINEIRVEPSSSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQR 123

Query: 257 PWGKWAAEIRDRSQGGRIWLGTYDTAEEAAVVYDKAAIKIRGANALTNFLKIPAPENIPP 78
           PWGKWAAEIRD  Q  RIWLGT+ TAEEAA+VYD AAIK+RG +ALTNF   P PE +  
Sbjct: 124 PWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPEPVQE 183

Query: 77  AETPEE--------VSKLEEYEAESPTSVFRF 6
            E   E         S  +     SPTSV  +
Sbjct: 184 QEQEPESNMSVSISESMDDSQHLSSPTSVLNY 215


>ref|XP_004149454.1| PREDICTED: ethylene-responsive transcription factor CRF4-like
           [Cucumis sativus]
          Length = 326

 Score =  131 bits (329), Expect = 1e-28
 Identities = 90/212 (42%), Positives = 118/212 (55%), Gaps = 14/212 (6%)
 Frame = -3

Query: 599 PVKFKVHRSFTSKQLSSTLPNRGISESSRVVRICVXXXXXXXXXXXXXDQKDYMIRRKIN 420
           PVKF  HR+FT+K  +     +     SRVVRI V              + D+  R+++ 
Sbjct: 8   PVKFTEHRNFTNKFSAK----KHHQSESRVVRISVTDPDATDSSSD---EDDFFERQRV- 59

Query: 419 KKYISEIKIEPLSEKSPEKRNGVVK--KKKIEGPT---KKNDKNMVPQNYPKYRGVRCRP 255
           KKYI+EIKI+         RN ++   +K+  G     ++  K + P N  K+RGVR RP
Sbjct: 60  KKYINEIKIQSGC------RNNLLPSCRKRPAGDRSEFRRQGKVVPPTNGKKFRGVRQRP 113

Query: 254 WGKWAAEIRDRSQGGRIWLGTYDTAEEAAVVYDKAAIKIRGANALTNFL---KIPAPE-- 90
           WGKWAAEIRD ++  R+WLGTYDTAEEAA+VYD AAI++RG +ALTNF     +P PE  
Sbjct: 114 WGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFATPPPVPMPEKE 173

Query: 89  ----NIPPAETPEEVSKLEEYEAESPTSVFRF 6
               NIP        S  E +   SPTSV  F
Sbjct: 174 VETANIPSVSGSYYDSSEESHNLSSPTSVLHF 205


>ref|XP_002267400.1| PREDICTED: ethylene-responsive transcription factor CRF4 [Vitis
           vinifera] gi|147838098|emb|CAN74147.1| hypothetical
           protein VITISV_018946 [Vitis vinifera]
          Length = 341

 Score =  129 bits (325), Expect = 3e-28
 Identities = 87/211 (41%), Positives = 115/211 (54%), Gaps = 13/211 (6%)
 Frame = -3

Query: 599 PVKFKVHRSFTSKQL-SSTLPNRGISESSRVVRICVXXXXXXXXXXXXXDQKDYMIRRKI 423
           P+K+  HRS T+KQ   S  P    S   RVVRI V              ++D +  R+ 
Sbjct: 8   PIKYTEHRSITNKQTRQSRRPPEQNSGVPRVVRISVTDPDATDSSSD---EEDELFSRQR 64

Query: 422 NKKYISEIKIEPLSEKSPEKRNGVVKKKKIEG-----PTKKNDKNMVPQNYPKYRGVRCR 258
            K+Y +EI I  +S+        V  +K+  G     P ++  K   P N  K+RGVR R
Sbjct: 65  VKRYTNEINIATVSKSIAP----VAGRKRGAGAGEMAPCRRPMKVAAPTNGRKFRGVRQR 120

Query: 257 PWGKWAAEIRDRSQGGRIWLGTYDTAEEAAVVYDKAAIKIRGANALTNFLKIPAPENIPP 78
           PWGKWAAEIRD ++  R+WLGTYDTAEEAA+VYD AAIK+RG +ALTNF+  P     PP
Sbjct: 121 PWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIKLRGPDALTNFVTPP-----PP 175

Query: 77  AETPEEVSKLEEYEA-------ESPTSVFRF 6
            +    ++ +  YE+        SPTSV  F
Sbjct: 176 PKPEINLTAVSGYESGDESRNLSSPTSVLHF 206


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