BLASTX nr result

ID: Bupleurum21_contig00036899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036899
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   194   8e-48
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei...   192   2e-47
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   192   2e-47
ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   187   1e-45

>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
           vinifera]
          Length = 2363

 Score =  194 bits (492), Expect = 8e-48
 Identities = 98/121 (80%), Positives = 105/121 (86%)
 Frame = -2

Query: 363 SVKLDLDGLATLRVRAFDSEENVFSSLVGIRFLWQLMPGTDGSTHHLVHVPLKLSPLSDC 184
           S+KLDLDGLATLRVRAFDSEENVFSSLVG++F+WQL P TDG   HLVHVPLK SPLSDC
Sbjct: 206 SIKLDLDGLATLRVRAFDSEENVFSSLVGLQFMWQLRPETDGLPPHLVHVPLKDSPLSDC 265

Query: 183 GGLCGDLDVQIKLEDSGVFSDLYVVKGTEIGHERVSVDLLEQMYDNMADSIVLTVAEAMS 4
           GGLCGDL VQIKLED G FSDLYVVKG  IGHE VSV LLE  +++MAD IVLTVAEAMS
Sbjct: 266 GGLCGDLSVQIKLEDGGAFSDLYVVKGIGIGHEVVSVHLLEPQFEHMADKIVLTVAEAMS 325

Query: 3   L 1
           L
Sbjct: 326 L 326


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  194 bits (492), Expect = 8e-48
 Identities = 98/121 (80%), Positives = 105/121 (86%)
 Frame = -2

Query: 363 SVKLDLDGLATLRVRAFDSEENVFSSLVGIRFLWQLMPGTDGSTHHLVHVPLKLSPLSDC 184
           S+KLDLDGLATLRVRAFDSEENVFSSLVG++F+WQL P TDG   HLVHVPLK SPLSDC
Sbjct: 131 SIKLDLDGLATLRVRAFDSEENVFSSLVGLQFMWQLRPETDGLPPHLVHVPLKDSPLSDC 190

Query: 183 GGLCGDLDVQIKLEDSGVFSDLYVVKGTEIGHERVSVDLLEQMYDNMADSIVLTVAEAMS 4
           GGLCGDL VQIKLED G FSDLYVVKG  IGHE VSV LLE  +++MAD IVLTVAEAMS
Sbjct: 191 GGLCGDLSVQIKLEDGGAFSDLYVVKGIGIGHEVVSVHLLEPQFEHMADKIVLTVAEAMS 250

Query: 3   L 1
           L
Sbjct: 251 L 251


>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
           sativus]
          Length = 1758

 Score =  192 bits (489), Expect = 2e-47
 Identities = 95/121 (78%), Positives = 108/121 (89%)
 Frame = -2

Query: 363 SVKLDLDGLATLRVRAFDSEENVFSSLVGIRFLWQLMPGTDGSTHHLVHVPLKLSPLSDC 184
           S+KLDLDGLATLRVRAFDSEENVFSSLVG++F+W L+P T+GS+HHL H+PL  SPLSDC
Sbjct: 115 SIKLDLDGLATLRVRAFDSEENVFSSLVGLQFMWHLIPETEGSSHHLAHLPLNDSPLSDC 174

Query: 183 GGLCGDLDVQIKLEDSGVFSDLYVVKGTEIGHERVSVDLLEQMYDNMADSIVLTVAEAMS 4
           GGLCGDL++QIKLEDSGVFSDL+VV+G EIGHE VSV LLE    +MAD IVLTVAEAMS
Sbjct: 175 GGLCGDLNIQIKLEDSGVFSDLFVVRGIEIGHEIVSVHLLEPDVKHMADKIVLTVAEAMS 234

Query: 3   L 1
           L
Sbjct: 235 L 235


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
           210-like [Cucumis sativus]
          Length = 2257

 Score =  192 bits (489), Expect = 2e-47
 Identities = 95/121 (78%), Positives = 108/121 (89%)
 Frame = -2

Query: 363 SVKLDLDGLATLRVRAFDSEENVFSSLVGIRFLWQLMPGTDGSTHHLVHVPLKLSPLSDC 184
           S+KLDLDGLATLRVRAFDSEENVFSSLVG++F+W L+P T+GS+HHL H+PL  SPLSDC
Sbjct: 115 SIKLDLDGLATLRVRAFDSEENVFSSLVGLQFMWHLIPETEGSSHHLAHLPLNDSPLSDC 174

Query: 183 GGLCGDLDVQIKLEDSGVFSDLYVVKGTEIGHERVSVDLLEQMYDNMADSIVLTVAEAMS 4
           GGLCGDL++QIKLEDSGVFSDL+VV+G EIGHE VSV LLE    +MAD IVLTVAEAMS
Sbjct: 175 GGLCGDLNIQIKLEDSGVFSDLFVVRGIEIGHEIVSVHLLEPDVKHMADKIVLTVAEAMS 234

Query: 3   L 1
           L
Sbjct: 235 L 235


>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine
           max]
          Length = 2304

 Score =  187 bits (474), Expect = 1e-45
 Identities = 94/121 (77%), Positives = 106/121 (87%)
 Frame = -2

Query: 363 SVKLDLDGLATLRVRAFDSEENVFSSLVGIRFLWQLMPGTDGSTHHLVHVPLKLSPLSDC 184
           S+KLDL+GLATLRVRAFDSEENVFSSLVG++F+W LMP  +G   HLV+VPLK SPLSDC
Sbjct: 124 SIKLDLEGLATLRVRAFDSEENVFSSLVGLQFMWSLMPEANGLPCHLVNVPLKDSPLSDC 183

Query: 183 GGLCGDLDVQIKLEDSGVFSDLYVVKGTEIGHERVSVDLLEQMYDNMADSIVLTVAEAMS 4
           GGLCG+LD+QIKLED+GVFSDL+VVKG EIGHE VSV LLE    N+AD IVLTVAEAMS
Sbjct: 184 GGLCGNLDIQIKLEDNGVFSDLFVVKGIEIGHEIVSVHLLEPQLKNLADEIVLTVAEAMS 243

Query: 3   L 1
           L
Sbjct: 244 L 244


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