BLASTX nr result

ID: Bupleurum21_contig00036895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036895
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263234.2| PREDICTED: DELLA protein RGL1-like [Vitis vi...    71   8e-11
emb|CAN65103.1| hypothetical protein VITISV_021044 [Vitis vinifera]    71   8e-11
ref|XP_002513361.1| DELLA protein GAI1, putative [Ricinus commun...    62   5e-08

>ref|XP_002263234.2| PREDICTED: DELLA protein RGL1-like [Vitis vinifera]
          Length = 616

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
 Frame = +3

Query: 42  IQTSEEEMFVDSFFXXXXXXXXXXXEHLNDTQVSIE---------QFDQDLENFTVTID- 191
           +  SEE+ FVDSF            ++ ND   ++E         Q D+ +E F +  + 
Sbjct: 148 LAASEEDEFVDSFINMDGYN-----DYGNDDNKALESQQGFDHNFQGDEAIEMFEMVDEG 202

Query: 192 YEDIRMMIEGEDNGANVMMPTSIKEVSHGVDQGLHLVHLLLACAEA 329
           YED  M++EGED G    +  S++EVSHGVDQGL LVH LLACAEA
Sbjct: 203 YEDAGMVVEGEDLGGGTDLMPSMEEVSHGVDQGLQLVHSLLACAEA 248


>emb|CAN65103.1| hypothetical protein VITISV_021044 [Vitis vinifera]
          Length = 530

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
 Frame = +3

Query: 42  IQTSEEEMFVDSFFXXXXXXXXXXXEHLNDTQVSIE---------QFDQDLENFTVTID- 191
           +  SEE+ FVDSF            ++ ND   ++E         Q D+ +E F +  + 
Sbjct: 62  LAASEEDEFVDSFINMDGYN-----DYGNDDNKALESQQGFDHNFQGDEAIEMFEMVDEG 116

Query: 192 YEDIRMMIEGEDNGANVMMPTSIKEVSHGVDQGLHLVHLLLACAEA 329
           YED  M++EGED G    +  S++EVSHGVDQGL LVH LLACAEA
Sbjct: 117 YEDAGMVVEGEDLGGGTDLMPSMEEVSHGVDQGLQLVHSLLACAEA 162


>ref|XP_002513361.1| DELLA protein GAI1, putative [Ricinus communis]
           gi|223547269|gb|EEF48764.1| DELLA protein GAI1, putative
           [Ricinus communis]
          Length = 545

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 22/130 (16%)
 Frame = +3

Query: 6   ELWFPSDYCTA---GIQTSEEEMFVDSFFXXXXXXXXXXXEHLNDTQVSIE------QFD 158
           EL  PSD  T+    +  SE +  VDSF             H +   +  +      Q D
Sbjct: 48  ELLSPSDDATSTPHDLAASEVDELVDSFINVDHQDNGHDDHHQSPDDLEYQDHFDHFQHD 107

Query: 159 QDLENFTVTID-YEDIRMMIEGED---------NGANV---MMPTSIKEVSHGVDQGLHL 299
           + +E F++  D + D+ MMI G D         N A V   M+P S++EVS+GVD+GLHL
Sbjct: 108 EMVETFSMLNDIFVDVPMMIGGGDLEMSTGSIENSAAVGPGMVP-SMEEVSYGVDRGLHL 166

Query: 300 VHLLLACAEA 329
           VHLLLACAEA
Sbjct: 167 VHLLLACAEA 176


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