BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036866
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   106   5e-36
gb|ACB28472.1| polyprotein [Ananas comosus]                           105   2e-35
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   105   4e-35
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   100   2e-34
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...   100   2e-34

>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  106 bits (265), Expect(2) = 5e-36
 Identities = 45/71 (63%), Positives = 58/71 (81%)
 Frame = +2

Query: 2    FVTGLPDSQGYSVILVVVDRLSKFAHFIPLKHPFDAKIVAQAYIDNVFKLHGWPQSVVSD 181
            F+ GLP+S+ YSVI+VVVDRLSK+AHFIP+ HP+ A  +AQ ++ N+FKLHG P S+V+D
Sbjct: 1125 FIEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTD 1184

Query: 182  RDPIFLSNFWK 214
            RDP F S FWK
Sbjct: 1185 RDPTFTSTFWK 1195



 Score = 69.7 bits (169), Expect(2) = 5e-36
 Identities = 30/47 (63%), Positives = 34/47 (72%)
 Frame = +1

Query: 235  TIFKISSAYHPATDGQTEVVNRSLEMYLRCMCREKEKTWKSWLPLAE 375
            T  K SSAYHP TDGQTE+VN+ +E YLRC   +K K W  WLPLAE
Sbjct: 1203 TTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWLPLAE 1249


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  105 bits (261), Expect(2) = 2e-35
 Identities = 46/71 (64%), Positives = 59/71 (83%)
 Frame = +2

Query: 2   FVTGLPDSQGYSVILVVVDRLSKFAHFIPLKHPFDAKIVAQAYIDNVFKLHGWPQSVVSD 181
           F+ GLP+SQG  VI+VVVDRLSK+AHFI L HP+ A  VAQ ++DN++KLHG P+S+VSD
Sbjct: 784 FIEGLPNSQGKEVIMVVVDRLSKYAHFIALSHPYTASSVAQLFLDNIYKLHGMPRSIVSD 843

Query: 182 RDPIFLSNFWK 214
           RD IF+S FW+
Sbjct: 844 RDTIFVSQFWQ 854



 Score = 69.3 bits (168), Expect(2) = 2e-35
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = +1

Query: 247 ISSAYHPATDGQTEVVNRSLEMYLRCMCREKEKTWKSWLPLAE 375
           +S+AYHP +DGQTEVVNR LE YLRCM  E+ K W  WLPLAE
Sbjct: 866 LSTAYHPQSDGQTEVVNRCLENYLRCMAGERPKEWAKWLPLAE 908


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  105 bits (262), Expect(2) = 4e-35
 Identities = 46/71 (64%), Positives = 58/71 (81%)
 Frame = +2

Query: 2    FVTGLPDSQGYSVILVVVDRLSKFAHFIPLKHPFDAKIVAQAYIDNVFKLHGWPQSVVSD 181
            F+ GLP S+GY  +LVVVDRLSK++HFI LKHP+ AK++A  +I  V +LHG P S+VSD
Sbjct: 941  FIMGLPKSKGYEAVLVVVDRLSKYSHFILLKHPYTAKVIADVFIREVVRLHGIPLSIVSD 1000

Query: 182  RDPIFLSNFWK 214
            RDPIF+SNFWK
Sbjct: 1001 RDPIFMSNFWK 1011



 Score = 67.8 bits (164), Expect(2) = 4e-35
 Identities = 30/47 (63%), Positives = 34/47 (72%)
 Frame = +1

Query: 235  TIFKISSAYHPATDGQTEVVNRSLEMYLRCMCREKEKTWKSWLPLAE 375
            T  K+S AYHP TDGQTEVVNR LE YLRC   ++ K W SW+P AE
Sbjct: 1019 TKLKMSIAYHPETDGQTEVVNRCLETYLRCFIADQPKNWASWIPWAE 1065


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  100 bits (248), Expect(2) = 2e-34
 Identities = 47/71 (66%), Positives = 55/71 (77%)
 Frame = +2

Query: 2    FVTGLPDSQGYSVILVVVDRLSKFAHFIPLKHPFDAKIVAQAYIDNVFKLHGWPQSVVSD 181
            F+ GLP S G +VI+VVVDRLSK AHFI L HP+ A  VA AY+DNVFKLHG P S+VSD
Sbjct: 1160 FIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTSIVSD 1219

Query: 182  RDPIFLSNFWK 214
            RD +F S FW+
Sbjct: 1220 RDVVFTSEFWR 1230



 Score = 70.5 bits (171), Expect(2) = 2e-34
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 244  KISSAYHPATDGQTEVVNRSLEMYLRCMCREKEKTWKSWLPLAE 375
            K++SAYHP +DGQTEVVNR LE YLRCMC ++ + W  WL LAE
Sbjct: 1241 KLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAE 1284


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 99.8 bits (247), Expect(2) = 2e-34
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = +2

Query: 2    FVTGLPDSQGYSVILVVVDRLSKFAHFIPLKHPFDAKIVAQAYIDNVFKLHGWPQSVVSD 181
            F+ GLP+S G SVI+VVVDRLSK AHF+ L HP+ A  VAQA++DNV+K HG P S+VSD
Sbjct: 1131 FIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPYSALTVAQAFLDNVYKHHGCPTSIVSD 1190

Query: 182  RDPIFLSNFWK 214
            RD +F S+FWK
Sbjct: 1191 RDVLFTSDFWK 1201



 Score = 70.9 bits (172), Expect(2) = 2e-34
 Identities = 30/44 (68%), Positives = 34/44 (77%)
 Frame = +1

Query: 244  KISSAYHPATDGQTEVVNRSLEMYLRCMCREKEKTWKSWLPLAE 375
            ++SSAYHP +DGQTEVVNR LE YLRCMC  +   W  WLPLAE
Sbjct: 1212 RMSSAYHPQSDGQTEVVNRCLENYLRCMCHARPHLWNKWLPLAE 1255