BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036862
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...   157   6e-37
emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]   157   6e-37
ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_003602939.1| Pentatricopeptide repeat-containing protein ...   140   1e-31
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...   139   2e-31

>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  157 bits (398), Expect = 6e-37
 Identities = 75/99 (75%), Positives = 88/99 (88%)
 Frame = +2

Query: 2   LNKASYRIVLNSLCREGELGKASRLLGLMLSRGFLPHFATSNELLVQLCKAGRAADAVKI 181
           LNKASYRIVLNSLCREGEL KA++L+GLML RG LPHFATSNELLV LC+AG+  DAV  
Sbjct: 410 LNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMA 469

Query: 182 LFGMMNMGFKPEPDSWSLLIELICRERKLVAAFELLDEL 298
           L G++ +GFKPEP+SW+LL+ELICRERKL+ AFELLD+L
Sbjct: 470 LLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDL 508


>emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score =  157 bits (398), Expect = 6e-37
 Identities = 75/99 (75%), Positives = 88/99 (88%)
 Frame = +2

Query: 2   LNKASYRIVLNSLCREGELGKASRLLGLMLSRGFLPHFATSNELLVQLCKAGRAADAVKI 181
           LNKASYRIVLNSLCREGEL KA++L+GLML RG LPHFATSNELLV LC+AG+  DAV  
Sbjct: 453 LNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMA 512

Query: 182 LFGMMNMGFKPEPDSWSLLIELICRERKLVAAFELLDEL 298
           L G++ +GFKPEP+SW+LL+ELICRERKL+ AFELLD+L
Sbjct: 513 LLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDL 551


>ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|222842808|gb|EEE80355.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/100 (75%), Positives = 85/100 (85%)
 Frame = +2

Query: 2   LNKASYRIVLNSLCREGELGKASRLLGLMLSRGFLPHFATSNELLVQLCKAGRAADAVKI 181
           LNKASYRIVLNSLC++G+L KA  LLGL LSRGF+PH ATSNELLV LCKAG A DAV  
Sbjct: 400 LNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVA 459

Query: 182 LFGMMNMGFKPEPDSWSLLIELICRERKLVAAFELLDELT 301
           L+G+  MGFKPE DSW+LL+E +CRERKL+ AFELLDELT
Sbjct: 460 LYGLAEMGFKPEQDSWALLVEFVCRERKLLLAFELLDELT 499


>ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491987|gb|AES73190.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/99 (69%), Positives = 83/99 (83%)
 Frame = +2

Query: 2   LNKASYRIVLNSLCREGELGKASRLLGLMLSRGFLPHFATSNELLVQLCKAGRAADAVKI 181
           LNK SYRIVLNSL +  EL KA++LLGLMLSRGF+PH+ATSNELLV+LCK G A DA   
Sbjct: 483 LNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATA 542

Query: 182 LFGMMNMGFKPEPDSWSLLIELICRERKLVAAFELLDEL 298
           LF +++MGF+P+ DSW LLI+LICR+RKL+  FELLDEL
Sbjct: 543 LFDLVDMGFQPQHDSWELLIDLICRDRKLLYVFELLDEL 581



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/95 (32%), Positives = 53/95 (55%)
 Frame = +2

Query: 14  SYRIVLNSLCREGELGKASRLLGLMLSRGFLPHFATSNELLVQLCKAGRAADAVKILFGM 193
           +Y +++N  CREG+  +A  ++  M + G  P+    + L+  LCKAG+  DA  +L  M
Sbjct: 347 TYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEM 406

Query: 194 MNMGFKPEPDSWSLLIELICRERKLVAAFELLDEL 298
            + G KP+  +++ LI    R  ++  A ELL E+
Sbjct: 407 KSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEM 441


>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/99 (69%), Positives = 80/99 (80%)
 Frame = +2

Query: 2   LNKASYRIVLNSLCREGELGKASRLLGLMLSRGFLPHFATSNELLVQLCKAGRAADAVKI 181
           LNK SYRIVLN LC++GEL K+  LLGLMLSRGF+PH+ATSNELLV LC+AG   +AV  
Sbjct: 409 LNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTA 468

Query: 182 LFGMMNMGFKPEPDSWSLLIELICRERKLVAAFELLDEL 298
           LFG+  MGF PEP SW+ LIE ICRERKL+  FEL+DEL
Sbjct: 469 LFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDEL 507