BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036853
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19224.3| unnamed protein product [Vitis vinifera]              171   4e-41
ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   171   4e-41
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   148   4e-34
ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containi...   146   1e-33

>emb|CBI19224.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  171 bits (434), Expect = 4e-41
 Identities = 88/152 (57%), Positives = 108/152 (71%)
 Frame = +2

Query: 2   LEILTWMETREGFKMSAFDHAVRLDSIIKKLSIAEGEKYYNNLPNITAKKYSFRHLLSFY 181
           LEIL WME +  F+MSA DHA+RL+ IIK  S+AE E+Y+ +LPN +++K +   LL  Y
Sbjct: 90  LEILAWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAY 149

Query: 182 VKERDTEKAEALMTRLNELGWIVNPHPLNEMMKLYAATSQFEKVVFVIQNMKRNKIPKTF 361
           VKER  EKAEALM +LN+LG  V+PHP NEMMKLY ATSQFE+V  VI  MK+NKIP   
Sbjct: 150 VKERAIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNV 209

Query: 362 LSYNLWMTACAXXXXXXXXXXXYKEMKKDKNV 457
           LSYNLWM+AC+           YK+M  DKNV
Sbjct: 210 LSYNLWMSACSEVSGLASAEMVYKDMVDDKNV 241


>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Vitis vinifera]
          Length = 475

 Score =  171 bits (434), Expect = 4e-41
 Identities = 88/152 (57%), Positives = 108/152 (71%)
 Frame = +2

Query: 2   LEILTWMETREGFKMSAFDHAVRLDSIIKKLSIAEGEKYYNNLPNITAKKYSFRHLLSFY 181
           LEIL WME +  F+MSA DHA+RL+ IIK  S+AE E+Y+ +LPN +++K +   LL  Y
Sbjct: 63  LEILAWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAY 122

Query: 182 VKERDTEKAEALMTRLNELGWIVNPHPLNEMMKLYAATSQFEKVVFVIQNMKRNKIPKTF 361
           VKER  EKAEALM +LN+LG  V+PHP NEMMKLY ATSQFE+V  VI  MK+NKIP   
Sbjct: 123 VKERAIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNV 182

Query: 362 LSYNLWMTACAXXXXXXXXXXXYKEMKKDKNV 457
           LSYNLWM+AC+           YK+M  DKNV
Sbjct: 183 LSYNLWMSACSEVSGLASAEMVYKDMVDDKNV 214


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  148 bits (374), Expect = 4e-34
 Identities = 83/154 (53%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
 Frame = +2

Query: 2   LEILTWMETREGFKMSAFDHAVRLDSIIKKLSIAEGEKYYNNLPN--ITAKKYSFRHLLS 175
           LEI TWMET++ F+MS  D+A+RL+ IIK   I E E+Y+N +P+  +T K  SF  LL 
Sbjct: 81  LEIFTWMETQKNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASFA-LLH 139

Query: 176 FYVKERDTEKAEALMTRLNELGWIVNPHPLNEMMKLYAATSQFEKVVFVIQNMKRNKIPK 355
            YVK +D  KAEALM +L  LG IVN +P NEMMKLY ATSQ+EKV  VI  MKRNKI  
Sbjct: 140 GYVKVKDVVKAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNKIAL 199

Query: 356 TFLSYNLWMTACAXXXXXXXXXXXYKEMKKDKNV 457
             LSYNLWM++             YKEM  D NV
Sbjct: 200 NLLSYNLWMSSYGEVSKVVKVELVYKEMVNDDNV 233


>ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Cucumis sativus]
          Length = 439

 Score =  147 bits (372), Expect = 7e-34
 Identities = 77/152 (50%), Positives = 100/152 (65%)
 Frame = +2

Query: 2   LEILTWMETREGFKMSAFDHAVRLDSIIKKLSIAEGEKYYNNLPNITAKKYSFRHLLSFY 181
           LE L  METR+ F+M   +HA+RL+  IK   + + E+Y+N LP I ++K S   LL  Y
Sbjct: 112 LEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGY 171

Query: 182 VKERDTEKAEALMTRLNELGWIVNPHPLNEMMKLYAATSQFEKVVFVIQNMKRNKIPKTF 361
           VKER+TEKAEA M +L + G +VN H  NEMMKLY AT Q EKV  VI++MK+N+IP+  
Sbjct: 172 VKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNV 231

Query: 362 LSYNLWMTACAXXXXXXXXXXXYKEMKKDKNV 457
           LSYNLWM AC+           ++EM  DKNV
Sbjct: 232 LSYNLWMNACSELYGVGSIELVFEEMLTDKNV 263


>ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Cucumis sativus]
          Length = 439

 Score =  146 bits (369), Expect = 1e-33
 Identities = 77/152 (50%), Positives = 99/152 (65%)
 Frame = +2

Query: 2   LEILTWMETREGFKMSAFDHAVRLDSIIKKLSIAEGEKYYNNLPNITAKKYSFRHLLSFY 181
           LE L  METR+ F+M   +HA+RL+  IK   + + E+Y+N LP I ++K S   LL  Y
Sbjct: 112 LEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGY 171

Query: 182 VKERDTEKAEALMTRLNELGWIVNPHPLNEMMKLYAATSQFEKVVFVIQNMKRNKIPKTF 361
           VKER+TEKAEA M +L + G +VN H  NEMMKLY AT Q EKV  VI++MK+N IP+  
Sbjct: 172 VKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNLIPRNV 231

Query: 362 LSYNLWMTACAXXXXXXXXXXXYKEMKKDKNV 457
           LSYNLWM AC+           ++EM  DKNV
Sbjct: 232 LSYNLWMNACSELYGVGSIELVFEEMLTDKNV 263