BLASTX nr result

ID: Bupleurum21_contig00036849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036849
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321564.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002511456.1| Endonuclease III, putative [Ricinus communis...    67   2e-09
emb|CBI15085.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002283633.1| PREDICTED: endonuclease III-like [Vitis vini...    66   3e-09
ref|XP_004152461.1| PREDICTED: DEMETER-like protein 2-like [Cucu...    65   6e-09

>ref|XP_002321564.1| predicted protein [Populus trichocarpa] gi|222868560|gb|EEF05691.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/89 (47%), Positives = 49/89 (55%), Gaps = 23/89 (25%)
 Frame = +3

Query: 165 CRAVRDDLLTHHGFPQEFAKYQRNVKPDPF-----DEKESQHF----------------- 278
           CRA+RD LL  HGFPQEFAKY+   K  P+     D++ES H                  
Sbjct: 45  CRAIRDSLLAFHGFPQEFAKYR---KQRPYLITLQDKEESPHLINNCDGKNDNVVKVEEE 101

Query: 279 -ESSGEENESVLDGLVSTILSQNTTDSNS 362
            E   EE ES LDGLV T+LSQNTT+ NS
Sbjct: 102 EEEEEEEEESALDGLVKTVLSQNTTEVNS 130


>ref|XP_002511456.1| Endonuclease III, putative [Ricinus communis]
           gi|223550571|gb|EEF52058.1| Endonuclease III, putative
           [Ricinus communis]
          Length = 291

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/66 (53%), Positives = 42/66 (63%)
 Frame = +3

Query: 165 CRAVRDDLLTHHGFPQEFAKYQRNVKPDPFDEKESQHFESSGEENESVLDGLVSTILSQN 344
           C  +RD LL  HGFPQEFAKY++       D K S    +S    E+VLDGLV T+LSQN
Sbjct: 41  CLCIRDSLLAFHGFPQEFAKYRKQRLGGDDDNKSSD--VNSDTAEETVLDGLVKTVLSQN 98

Query: 345 TTDSNS 362
           TT+ NS
Sbjct: 99  TTEVNS 104


>emb|CBI15085.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/83 (48%), Positives = 44/83 (53%), Gaps = 17/83 (20%)
 Frame = +3

Query: 165 CRAVRDDLLTHHGFPQEFAKYQRNVKPDPFDEKESQHFESSG-----------------E 293
           CRAVRDDLL  HGFPQ F KY R ++  P     S   +  G                  
Sbjct: 44  CRAVRDDLLALHGFPQRFEKY-RKLRLPPLPHTSSPGLDGGGGTPVKLDPSDGDDVNGSS 102

Query: 294 ENESVLDGLVSTILSQNTTDSNS 362
           + ESVLDGLVS ILSQNTTD NS
Sbjct: 103 QKESVLDGLVSIILSQNTTDVNS 125


>ref|XP_002283633.1| PREDICTED: endonuclease III-like [Vitis vinifera]
          Length = 310

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/83 (48%), Positives = 44/83 (53%), Gaps = 17/83 (20%)
 Frame = +3

Query: 165 CRAVRDDLLTHHGFPQEFAKYQRNVKPDPFDEKESQHFESSG-----------------E 293
           CRAVRDDLL  HGFPQ F KY R ++  P     S   +  G                  
Sbjct: 44  CRAVRDDLLALHGFPQRFEKY-RKLRLPPLPHTSSPGLDGGGGTPVKLDPSDGDDVNGSS 102

Query: 294 ENESVLDGLVSTILSQNTTDSNS 362
           + ESVLDGLVS ILSQNTTD NS
Sbjct: 103 QKESVLDGLVSIILSQNTTDVNS 125


>ref|XP_004152461.1| PREDICTED: DEMETER-like protein 2-like [Cucumis sativus]
          Length = 234

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 13/79 (16%)
 Frame = +3

Query: 165 CRAVRDDLLTHHGFPQEFAKYQRN-------------VKPDPFDEKESQHFESSGEENES 305
           C +VRDDLL  HGFP+EF KY++              V+ +  D  ES+  +    E ES
Sbjct: 55  CLSVRDDLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVD----EKES 110

Query: 306 VLDGLVSTILSQNTTDSNS 362
           VLDGLV T+LSQNTT++NS
Sbjct: 111 VLDGLVKTVLSQNTTEANS 129


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