BLASTX nr result

ID: Bupleurum21_contig00036835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036835
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
gb|AFK48051.1| unknown [Medicago truncatula]                          193   1e-47
ref|NP_566396.1| NDR1/HIN1-Like protein 1 [Arabidopsis thaliana]...   192   2e-47
gb|ABY88583.1| NHL1, partial [Arabidopsis thaliana]                   192   2e-47
gb|ABY88581.1| NHL1, partial [Arabidopsis thaliana]                   192   2e-47

>ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|222867424|gb|EEF04555.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  203 bits (517), Expect = 1e-50
 Identities = 97/145 (66%), Positives = 122/145 (84%)
 Frame = -2

Query: 436 KILKRVLIGISIFLLIVGLTVLITWAILQPKKPQFILQDASLYAFNVTANPTLLTSNFQL 257
           KI +R+  GI IFLLIV + +L+ WAIL+P KP+FILQDA++YAFNV++ P +LTSNFQ+
Sbjct: 15  KIFRRIFAGILIFLLIVLIIILLVWAILRPSKPKFILQDATVYAFNVSS-PNVLTSNFQV 73

Query: 256 TISSRNPNSKIGIYYDKLHVFATYRRQQITYYTSIPQTYQDKKEVNVWSPFIYGTNVPVA 77
           T+SSRNPN K+GIYYDKL V+ATYR QQIT  TSIP +YQ  KE++VWSPFIYG+ VPV+
Sbjct: 74  TLSSRNPNDKVGIYYDKLDVYATYRNQQITLRTSIPTSYQGHKEIDVWSPFIYGSAVPVS 133

Query: 76  PYNGVALSQEQAAGAIWMMIKINGR 2
           PYN VALSQ+QA G + +MIKI+GR
Sbjct: 134 PYNSVALSQDQATGTVLLMIKIDGR 158


>gb|AFK48051.1| unknown [Medicago truncatula]
          Length = 210

 Score =  193 bits (490), Expect = 1e-47
 Identities = 91/145 (62%), Positives = 115/145 (79%)
 Frame = -2

Query: 436 KILKRVLIGISIFLLIVGLTVLITWAILQPKKPQFILQDASLYAFNVTANPTLLTSNFQL 257
           K  +++  GI IFL IV +T+LI WA+L+P KP FILQD ++YAFN T  P  LTSNFQ+
Sbjct: 15  KRFRKIFWGIIIFLFIVLVTILIIWAVLKPSKPSFILQDVTVYAFNATV-PNFLTSNFQV 73

Query: 256 TISSRNPNSKIGIYYDKLHVFATYRRQQITYYTSIPQTYQDKKEVNVWSPFIYGTNVPVA 77
           T+SSRNPN KIGIYYD+L  + TYR QQITY T+IP +YQ+ KEV+VWSPF+YGTNVPVA
Sbjct: 74  TVSSRNPNDKIGIYYDRLDSYVTYRSQQITYRTAIPPSYQEHKEVDVWSPFVYGTNVPVA 133

Query: 76  PYNGVALSQEQAAGAIWMMIKINGR 2
           PYN VALSQ+Q  G + +++K +GR
Sbjct: 134 PYNSVALSQDQDNGNVLVVVKFDGR 158


>ref|NP_566396.1| NDR1/HIN1-Like protein 1 [Arabidopsis thaliana]
           gi|6041819|gb|AAF02134.1|AC009918_6 unknown protein
           [Arabidopsis thaliana]
           gi|9502172|gb|AAF88021.1|AF264697_1 NDR1/HIN1-Like
           protein 1 [Arabidopsis thaliana]
           gi|21595601|gb|AAM66116.1| harpin-induced protein-like
           [Arabidopsis thaliana] gi|56381911|gb|AAV85674.1|
           At3g11660 [Arabidopsis thaliana]
           gi|58331799|gb|AAW70397.1| At3g11660 [Arabidopsis
           thaliana] gi|332641559|gb|AEE75080.1| NDR1/HIN1-Like
           protein 1 [Arabidopsis thaliana]
          Length = 209

 Score =  192 bits (489), Expect = 2e-47
 Identities = 88/146 (60%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
 Frame = -2

Query: 436 KILKRVLIGISIFLLIVGLTVLITWAILQPKKPQFILQDASLYAFNVTANP-TLLTSNFQ 260
           K+++R+   I   L I+ LT+L+ WAILQP KP+FILQDA++YAFNV+ NP  LLTSNFQ
Sbjct: 13  KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQ 72

Query: 259 LTISSRNPNSKIGIYYDKLHVFATYRRQQITYYTSIPQTYQDKKEVNVWSPFIYGTNVPV 80
           +T+SSRNPN+KIGIYYD+L V+ATYR QQIT+ TSIP TYQ  K+V++WSPF+YGT+VP+
Sbjct: 73  ITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPI 132

Query: 79  APYNGVALSQEQAAGAIWMMIKINGR 2
           AP+NGV+L  ++  G + ++I+ +GR
Sbjct: 133 APFNGVSLDTDKDNGVVLLIIRADGR 158


>gb|ABY88583.1| NHL1, partial [Arabidopsis thaliana]
          Length = 181

 Score =  192 bits (489), Expect = 2e-47
 Identities = 88/146 (60%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
 Frame = -2

Query: 436 KILKRVLIGISIFLLIVGLTVLITWAILQPKKPQFILQDASLYAFNVTANP-TLLTSNFQ 260
           K+++R+   I   L I+ LT+L+ WAILQP KP+FILQDA++YAFNV+ NP  LLTSNFQ
Sbjct: 6   KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQ 65

Query: 259 LTISSRNPNSKIGIYYDKLHVFATYRRQQITYYTSIPQTYQDKKEVNVWSPFIYGTNVPV 80
           +T+SSRNPN+KIGIYYD+L V+ATYR QQIT+ TSIP TYQ  K+V++WSPF+YGT+VP+
Sbjct: 66  ITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPI 125

Query: 79  APYNGVALSQEQAAGAIWMMIKINGR 2
           AP+NGV+L  ++  G + ++I+ +GR
Sbjct: 126 APFNGVSLDTDKDNGVVLLIIRADGR 151


>gb|ABY88581.1| NHL1, partial [Arabidopsis thaliana]
          Length = 181

 Score =  192 bits (489), Expect = 2e-47
 Identities = 88/146 (60%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
 Frame = -2

Query: 436 KILKRVLIGISIFLLIVGLTVLITWAILQPKKPQFILQDASLYAFNVTANP-TLLTSNFQ 260
           K+++R+   I   L I+ LT+L+ WAILQP KP+FILQDA++YAFNV+ NP  LLTSNFQ
Sbjct: 6   KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQ 65

Query: 259 LTISSRNPNSKIGIYYDKLHVFATYRRQQITYYTSIPQTYQDKKEVNVWSPFIYGTNVPV 80
           +T+SSRNPN+KIGIYYD+L V+ATYR QQIT+ TSIP TYQ  K+V++WSPF+YGT+VP+
Sbjct: 66  ITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPI 125

Query: 79  APYNGVALSQEQAAGAIWMMIKINGR 2
           AP+NGV+L  ++  G + ++I+ +GR
Sbjct: 126 APFNGVSLDTDKDNGVVLLIIRADGR 151


Top