BLASTX nr result

ID: Bupleurum21_contig00036829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036829
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   110   9e-23
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R...   110   9e-23
ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_004158147.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   106   2e-21
ref|XP_004143728.1| PREDICTED: ATP-dependent DNA helicase PcrA-l...   106   2e-21

>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/76 (71%), Positives = 62/76 (81%)
 Frame = -2

Query: 383 DEIGAAVLQNYNNILKSCDALDYHDLISCSVKLLTDFPEVLKDCQVLWKATVVDEFQDTS 204
           +EIGAA+L+NYNNILKSC+ALDYHDLISCSVKLL+DFPEV K+CQ  WKA V+DEFQDTS
Sbjct: 400 NEIGAAILKNYNNILKSCNALDYHDLISCSVKLLSDFPEVFKECQDSWKAIVIDEFQDTS 459

Query: 203 GMNCRRVFKALLSFEK 156
            M   +  K L S  K
Sbjct: 460 AMQ-YKFLKMLASHHK 474



 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/62 (70%), Positives = 57/62 (91%)
 Frame = -2

Query: 188 RVFKALLSFEKEENKKVIEHIDKISTVRRCSFISAARDIFSAKISGTFKRNQLTQGRKVL 9
           RVFKAL+  EK++ K++I+HI+KIST+RRCSF+SAA DIFSAKISGTFKR++LT GRK+L
Sbjct: 645 RVFKALMPLEKDKKKRIIDHINKISTIRRCSFLSAASDIFSAKISGTFKRSELTHGRKIL 704

Query: 8   LT 3
           +T
Sbjct: 705 MT 706


>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
           gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
           pcrA, putative [Ricinus communis]
          Length = 1089

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/65 (78%), Positives = 58/65 (89%)
 Frame = -2

Query: 383 DEIGAAVLQNYNNILKSCDALDYHDLISCSVKLLTDFPEVLKDCQVLWKATVVDEFQDTS 204
           DEIGA++L NYN+ILKSC+ALDYHDLISCSVKLLTD+P+V K+CQ  WKA VVDEFQDTS
Sbjct: 368 DEIGASILGNYNDILKSCNALDYHDLISCSVKLLTDYPDVFKECQDSWKAIVVDEFQDTS 427

Query: 203 GMNCR 189
           GM  R
Sbjct: 428 GMQYR 432



 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/63 (74%), Positives = 58/63 (92%)
 Frame = -2

Query: 191 RRVFKALLSFEKEENKKVIEHIDKISTVRRCSFISAARDIFSAKISGTFKRNQLTQGRKV 12
           R+ FKALL FEK+E K+V++H++KI T+R+CSFISAA+DIFSAKISGTFKR+QL QGRKV
Sbjct: 612 RQAFKALLPFEKDEKKRVVDHVEKILTIRKCSFISAAKDIFSAKISGTFKRSQLNQGRKV 671

Query: 11  LLT 3
           LLT
Sbjct: 672 LLT 674


>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
           predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -2

Query: 383 DEIGAAVLQNYNNILKSCDALDYHDLISCSVKLLTDFPEVLKDCQVLWKATVVDEFQDTS 204
           DEIGAA+L NYN+IL+SC+ALDYHDLISCSVKLLTDFPEV +DC+  WKA V+DEFQDTS
Sbjct: 335 DEIGAAILGNYNDILRSCNALDYHDLISCSVKLLTDFPEVFEDCKDSWKAIVIDEFQDTS 394

Query: 203 GM 198
            M
Sbjct: 395 AM 396



 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/62 (80%), Positives = 58/62 (93%)
 Frame = -2

Query: 188 RVFKALLSFEKEENKKVIEHIDKISTVRRCSFISAARDIFSAKISGTFKRNQLTQGRKVL 9
           +VFKALL FEKEE ++VIEH+DKISTVR+CSFI+AA D+FSAKISGTFKR+QLTQGRKVL
Sbjct: 580 QVFKALLPFEKEEKRRVIEHVDKISTVRKCSFIAAACDVFSAKISGTFKRSQLTQGRKVL 639

Query: 8   LT 3
            T
Sbjct: 640 ST 641


>ref|XP_004158147.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase
           PcrA-like [Cucumis sativus]
          Length = 1129

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = -2

Query: 383 DEIGAAVLQNYNNILKSCDALDYHDLISCSVKLLTDFPEVLKDCQVLWKATVVDEFQDTS 204
           DE GA VL NYN+ILKSC+ALDYHDLISCS+KLLTDFPEV K+CQ  WKA +VDEFQDTS
Sbjct: 374 DEAGATVLDNYNDILKSCNALDYHDLISCSLKLLTDFPEVYKECQDSWKAIIVDEFQDTS 433

Query: 203 GM 198
            M
Sbjct: 434 SM 435



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 51/89 (57%), Positives = 62/89 (69%)
 Frame = -2

Query: 269 EVLKDCQVLWKATVVDEFQDTSGMNCRRVFKALLSFEKEENKKVIEHIDKISTVRRCSFI 90
           +V+K    L K T    F D       + FKAL+ FEKE+ K++I HIDKISTVR+C FI
Sbjct: 595 KVVKTILALLKTT----FPDCDDGAYHQAFKALMPFEKEDKKRIINHIDKISTVRKCRFI 650

Query: 89  SAARDIFSAKISGTFKRNQLTQGRKVLLT 3
            AARD+FS+KISGT KR+QL QGRKVL T
Sbjct: 651 DAARDVFSSKISGTLKRSQLNQGRKVLST 679


>ref|XP_004143728.1| PREDICTED: ATP-dependent DNA helicase PcrA-like [Cucumis sativus]
          Length = 1105

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = -2

Query: 383 DEIGAAVLQNYNNILKSCDALDYHDLISCSVKLLTDFPEVLKDCQVLWKATVVDEFQDTS 204
           DE GA VL NYN+ILKSC+ALDYHDLISCS+KLLTDFPEV K+CQ  WKA +VDEFQDTS
Sbjct: 377 DEAGATVLDNYNDILKSCNALDYHDLISCSLKLLTDFPEVYKECQDSWKAIIVDEFQDTS 436

Query: 203 GM 198
            M
Sbjct: 437 SM 438



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 51/89 (57%), Positives = 62/89 (69%)
 Frame = -2

Query: 269 EVLKDCQVLWKATVVDEFQDTSGMNCRRVFKALLSFEKEENKKVIEHIDKISTVRRCSFI 90
           +V+K    L K T    F D       + FKAL+ FEKE+ K++I HIDKISTVR+C FI
Sbjct: 598 KVVKTILALLKTT----FPDCDDGAYHQAFKALMPFEKEDKKRIINHIDKISTVRKCRFI 653

Query: 89  SAARDIFSAKISGTFKRNQLTQGRKVLLT 3
            AARD+FS+KISGT KR+QL QGRKVL T
Sbjct: 654 DAARDVFSSKISGTLKRSQLNQGRKVLST 682


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