BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036825
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    98   1e-18
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    76   4e-12
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    74   1e-11
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    70   2e-10
ref|XP_002454312.1| hypothetical protein SORBIDRAFT_04g028480 [S...    63   3e-08

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/133 (36%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
 Frame = -2

Query: 383 HTHQCAQVVMLCWSIWCRRNKWVWDRRNGSVFGVKAAAMHLLADWREEQMKIDARVSIGG 204
           H   CA++ ++C S+W +RN WVW++++ + +GV + A  LL + R      D  ++   
Sbjct: 520 HEDTCAKMALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLL-EQRTRAQSADEEIA-PP 577

Query: 203 LG-----ARSWSKPQNGWVKVNSDAAVF-QDGSVGIGAVVRNDRGEFLAAFCRKITGAWH 42
           LG      R W+KP+ GW+K+N+D A+F + G +G+G VVR+  G  + A   +  G + 
Sbjct: 578 LGHNTDVTRKWTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFT 637

Query: 41  PREAEAIALKEAL 3
            REAEA+++KEAL
Sbjct: 638 AREAEALSMKEAL 650


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 39/122 (31%), Positives = 60/122 (49%)
 Frame = -2

Query: 368 AQVVMLCWSIWCRRNKWVWDRRNGSVFGVKAAAMHLLADWREEQMKIDARVSIGGLGARS 189
           A+ + +CW +W RRN  VW+ R      V      +L  W      +   V++    ++ 
Sbjct: 605 AKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHANETLATAVTVPSYSSK- 663

Query: 188 WSKPQNGWVKVNSDAAVFQDGSVGIGAVVRNDRGEFLAAFCRKITGAWHPREAEAIALKE 9
           W KP  GW+K+N D AVF D    IGAV R+ +G F+  F +       P+  EA+ ++E
Sbjct: 664 WQKPDYGWIKINVDGAVFPDKG-AIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVRE 722

Query: 8   AL 3
            L
Sbjct: 723 VL 724


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
 Frame = -2

Query: 386  KHTHQCAQVVMLCWSIWCRRNKWVWDRRNGSVFGVKAAAMHLLADWREEQMKIDARVSIG 207
            K T   A   M+CW+IW  RNKWV++++  +   V   A+  + ++ EE+    + V   
Sbjct: 1145 KDTEWWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEF-EEECAHTSPVETL 1203

Query: 206  GLGARSWSKPQNGWVKVNSDAAVFQDGSVGIGAVVRNDRGEFLAAFCRKITGAW---HPR 36
                  WS P  G VK+N DAAVF+   +G+G VVR+  G+ L A C    G W    P 
Sbjct: 1204 NTHENGWSVPPVGMVKLNVDAAVFKHVGIGMGGVVRDAEGDVLLATC---CGGWAMEDPA 1260

Query: 35   EAEAIALKEAL 3
             AEA +L+  L
Sbjct: 1261 MAEACSLRYGL 1271


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 MLCWSIWCRRNKWVWDRRNGSVFGVKAAAMHLLADWREEQMKIDARVSIGGLGARSWSKP 177
           M+ W IW RRN  VWD +          A  LL  W+  +     +V        +W  P
Sbjct: 1   MMLWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQAARNSATTQVQQSPQDTIAWQPP 60

Query: 176 QNGWVKVNSDAAVFQDGS-VGIGAVVRNDRGEFLAAFCRKITGAWHPREAEAIALKEAL 3
             G++K N DAA+F + +  G G  VR+ RG FL A      G   P+EAEA+ L++A+
Sbjct: 61  AAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAI 119


>ref|XP_002454312.1| hypothetical protein SORBIDRAFT_04g028480 [Sorghum bicolor]
           gi|241934143|gb|EES07288.1| hypothetical protein
           SORBIDRAFT_04g028480 [Sorghum bicolor]
          Length = 316

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
 Frame = -2

Query: 365 QVVMLCWSIWCRRNKWVWDRRNGSVFGVKAAAMHLLADWRE-EQMKIDARVSIGGLGARS 189
           ++++ CW+IW  R K + DR   S   +      L+ ++   ++     +        ++
Sbjct: 131 RILVTCWAIWYARRKAIHDRIFQSPLSIMMMTNRLIEEFEFIQETDFKEKDHYQNKSTQN 190

Query: 188 WSKPQNGWVKVNSDAAVFQDGSVGIGAVV-RNDRGEFLAAFCRKITGAWHPREAEAIALK 12
              PQNG  K+N+DAA+ + G+ G+ AVV R D+GEF+AA    I    +P   EA+A  
Sbjct: 191 LISPQNGISKINTDAAIDRSGTKGVVAVVCRTDQGEFVAASAMVIPYIINPETLEAMACL 250

Query: 11  EAL 3
           EAL
Sbjct: 251 EAL 253