BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036804
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]              142   2e-32
gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-393...   142   3e-32
ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana] gi|...   142   3e-32
ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidop...   140   1e-31
ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer...   139   2e-31

>gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
          Length = 483

 Score =  142 bits (359), Expect = 2e-32
 Identities = 71/130 (54%), Positives = 87/130 (66%)
 Frame = -1

Query: 405 VDLPYAQLQVMSVPQNADILNVVFLRNISKGSWKALSGVRANSSILQLVPNVEFFQAMLR 226
           VDLPYAQL+V+S+P N D+LN  FLR+I + SWK+LSGVRAN  ILQLVP++E FQ++LR
Sbjct: 122 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLR 181

Query: 225 CLKLWARRRGVYXXXXXXXXXXXXXXXXXFICLRLPNIGLSAAVAAFFQIFDKWQWPTPV 46
           C+KLWA+RRGVY                 F+C   PN  LS+ +A FF  F  WQWPTPV
Sbjct: 182 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFALWQWPTPV 241

Query: 45  TLSSVILPST 16
            L     PST
Sbjct: 242 VLLEDTYPST 251


>gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
          Length = 482

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/130 (54%), Positives = 86/130 (66%)
 Frame = -1

Query: 405 VDLPYAQLQVMSVPQNADILNVVFLRNISKGSWKALSGVRANSSILQLVPNVEFFQAMLR 226
           VDLPYAQL+V+S+P N D+LN  FLR+I + SWK LSGVRAN  ILQLVP++E FQ++LR
Sbjct: 121 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLR 180

Query: 225 CLKLWARRRGVYXXXXXXXXXXXXXXXXXFICLRLPNIGLSAAVAAFFQIFDKWQWPTPV 46
           C+KLWA+RRGVY                 F+C   PN  LS+ +A FF  F  WQWPTPV
Sbjct: 181 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPV 240

Query: 45  TLSSVILPST 16
            L     PST
Sbjct: 241 VLLEDTYPST 250


>ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
           gi|62320636|dbj|BAD95301.1| poly(A) polymerase
           [Arabidopsis thaliana] gi|332640894|gb|AEE74415.1|
           poly(A) polymerase 3 [Arabidopsis thaliana]
          Length = 507

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/130 (54%), Positives = 86/130 (66%)
 Frame = -1

Query: 405 VDLPYAQLQVMSVPQNADILNVVFLRNISKGSWKALSGVRANSSILQLVPNVEFFQAMLR 226
           VDLPYAQL+V+S+P N D+LN  FLR+I + SWK LSGVRAN  ILQLVP++E FQ++LR
Sbjct: 146 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLR 205

Query: 225 CLKLWARRRGVYXXXXXXXXXXXXXXXXXFICLRLPNIGLSAAVAAFFQIFDKWQWPTPV 46
           C+KLWA+RRGVY                 F+C   PN  LS+ +A FF  F  WQWPTPV
Sbjct: 206 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPV 265

Query: 45  TLSSVILPST 16
            L     PST
Sbjct: 266 VLLEDTYPST 275


>ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
           lyrata] gi|297328320|gb|EFH58739.1| polynucleotide
           adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/130 (53%), Positives = 87/130 (66%)
 Frame = -1

Query: 405 VDLPYAQLQVMSVPQNADILNVVFLRNISKGSWKALSGVRANSSILQLVPNVEFFQAMLR 226
           VDLPYAQL+V+S+P N D+LN  FLR+I + SWK+LSGVRAN  ILQLVP++E FQ++LR
Sbjct: 148 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLR 207

Query: 225 CLKLWARRRGVYXXXXXXXXXXXXXXXXXFICLRLPNIGLSAAVAAFFQIFDKWQWPTPV 46
           C+KLWA+RRGVY                 F+C    N  LS+ +A FF IF  WQWPTPV
Sbjct: 208 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYESNATLSSLLANFFYIFAHWQWPTPV 267

Query: 45  TLSSVILPST 16
            L     P+T
Sbjct: 268 VLLEDTYPAT 277


>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
           gi|296083219|emb|CBI22855.3| unnamed protein product
           [Vitis vinifera]
          Length = 563

 Score =  139 bits (350), Expect = 2e-31
 Identities = 67/129 (51%), Positives = 88/129 (68%)
 Frame = -1

Query: 405 VDLPYAQLQVMSVPQNADILNVVFLRNISKGSWKALSGVRANSSILQLVPNVEFFQAMLR 226
           VDLPYAQL+++ VP+N ++LN  FLRNI + SWK+LSGVRAN  ILQLVPNVE FQ++LR
Sbjct: 204 VDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVENFQSILR 263

Query: 225 CLKLWARRRGVYXXXXXXXXXXXXXXXXXFICLRLPNIGLSAAVAAFFQIFDKWQWPTPV 46
           C+KLWA+RRGVY                 F+C + P+  L+  +++FF+ F  W WPTPV
Sbjct: 264 CIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPV 323

Query: 45  TLSSVILPS 19
            L    LP+
Sbjct: 324 ALEDGRLPT 332