BLASTX nr result

ID: Bupleurum21_contig00036793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036793
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    99   3e-19
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    94   1e-17
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...    94   1e-17
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            92   4e-17

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  111 bits (278), Expect = 5e-23
 Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   WTSKFLSFGGRLVLLRSTIFAIQSFWAAHFILPTSVINLIDQIMKRFLWKGSEEK-GGAK 178
           WT + LS+ GR+ L+ S +F+IQ +WA+ F+LP  VI  ++QIMK FLW GS+ +  GAK
Sbjct: 87  WTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAK 146

Query: 179 VSWSTVCLPKEQGGLGFKDTKIWNKAQILHHLW 277
           V+W  VCLPK++GGLG K  K WNK  +L H+W
Sbjct: 147 VAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIW 179


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/93 (47%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   WTSKFLSFGGRLVLLRSTIFAIQSFWAAHFILPTSVINLIDQIMKRFLWKGSEE-KGGAK 178
           W+++ LSF GRL L+RS + ++Q +WA+ F+LP  V   +D+I++ +LW+G EE +GGAK
Sbjct: 67  WSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGAK 126

Query: 179 VSWSTVCLPKEQGGLGFKDTKIWNKAQILHHLW 277
           V+W  VCLP ++GGL  +D   WN A  L  LW
Sbjct: 127 VAWDEVCLPFDEGGLAIRDGSSWNIASTLKILW 159


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2    WTSKFLSFGGRLVLLRSTIFAIQSFWAAHFILPTSVINLIDQIMKRFLWKGSEEKG-GAK 178
            WT++ LSF GRL LL+S I++  +FWA+ FI P   +  ++Q+   FLW G+     GAK
Sbjct: 794  WTARHLSFAGRLQLLKSVIYSTINFWASVFIFPNQCLQKLEQMCNAFLWSGAPNSARGAK 853

Query: 179  VSWSTVCLPKEQGGLGFKDTKIWNKAQILHHLW 277
            +SW+ VC PKE GGLG K    WN+   L  +W
Sbjct: 854  ISWNIVCSPKEAGGLGLKRLSSWNRILALKLIW 886


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   WTSKFLSFGGRLVLLRSTIFAIQSFWAAHFILPTSVINLIDQIMKRFLWKGSEE-KGGAK 178
           W+++ LSF   L L+R  + ++Q +WA+ F+LP  V   +D+I++ +LW+G EE +GGAK
Sbjct: 252 WSARVLSFASSLQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILRSYLWRGKEEGRGGAK 311

Query: 179 VSWSTVCLPKEQGGLGFKDTKIWNKAQILHHLW 277
           V+W  VCLP ++GGL   D   WNKA  L  LW
Sbjct: 312 VAWDEVCLPFDEGGLAICDGSSWNKASTLKILW 344


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   WTSKFLSFGGRLVLLRSTIFAIQSFWAAHFILPTSVINLIDQIMKRFLWKGS-EEKGGAK 178
           W SK LSF GR  L+ S IF + +FW + F+LP   I  I+ +  +FLW GS + +  +K
Sbjct: 653 WVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSK 712

Query: 179 VSWSTVCLPKEQGGLGFKDTKIWNKAQILHHLW 277
           VSW   CLPK +GGLGF+    WNK  +L  +W
Sbjct: 713 VSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIW 745


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