BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036792
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...   141   6e-32
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]   124   8e-27
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   118   6e-25
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   117   1e-24
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   112   2e-23

>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score =  141 bits (355), Expect = 6e-32
 Identities = 64/117 (54%), Positives = 84/117 (71%), Gaps = 3/117 (2%)
 Frame = -1

Query: 347 LWHTRLGHMPYNKLKC---LHLHTGNIPDFPCTICAKARQTRLPFPHSQISSNKKFQLLH 177
           LWH RLGH+P++ +K    L +   N   FPC IC  ARQ++ PFP S I S + F+L+H
Sbjct: 15  LWHFRLGHLPFHAMKTIKTLPVTVDNKQTFPCDICPMARQSKPPFPSSTIKSKQCFELIH 74

Query: 176 IDVWGPFSIPTYNKFRYFLTIVDDFTRTTWTHLLTNKSNAFTFIKSFIAFVETQFNS 6
           ID WGP+++PTY   RYFLTIVDDF+R TWT+LLT KSNAF  +KS ++ +E QF+S
Sbjct: 75  IDTWGPYNVPTYKGERYFLTIVDDFSRATWTYLLTTKSNAFATLKSLLSLIERQFSS 131


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/130 (43%), Positives = 83/130 (63%), Gaps = 3/130 (2%)
 Frame = -1

Query: 386 SLNSVSQCNKSALLWHTRLGHMPYNKLKCLHLHTGN---IPDFPCTICAKARQTRLPFPH 216
           S + V  C  ++ LWH RLGH+P  K++ ++    +   I +  C IC  A+Q +LPFP 
Sbjct: 495 SSSLVESCTVNSDLWHFRLGHIPNAKIQLINSSDSSXKXIHNKVCXICPLAKQKKLPFPI 554

Query: 215 SQISSNKKFQLLHIDVWGPFSIPTYNKFRYFLTIVDDFTRTTWTHLLTNKSNAFTFIKSF 36
           S   SNK FQL+H ++WGPFSIP+Y+ + +FLT VDDFTR TW  L+  K+     + +F
Sbjct: 555 SNSQSNKAFQLVHXBIWGPFSIPSYSXYXFFLTXVDDFTRFTWLFLMKTKTETXAILTNF 614

Query: 35  IAFVETQFNS 6
           +A+V T FN+
Sbjct: 615 LAYVHTHFNT 624


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/121 (47%), Positives = 76/121 (62%), Gaps = 7/121 (5%)
 Frame = -1

Query: 347  LWHTRLGHMPYNKLKCL-------HLHTGNIPDFPCTICAKARQTRLPFPHSQISSNKKF 189
            LWH RLGH  +++ K L       H   GN     C IC +A+QTRLPFP S I++   F
Sbjct: 769  LWHLRLGHPSFSRFKLLSRLLPDIHKEIGN----HCPICPQAKQTRLPFPKSSITTKFPF 824

Query: 188  QLLHIDVWGPFSIPTYNKFRYFLTIVDDFTRTTWTHLLTNKSNAFTFIKSFIAFVETQFN 9
             LLH DVWGP  IP +   RYFLTIVDDF+R TW  L+ +KS   + + +F+ FV+TQF+
Sbjct: 825  SLLHCDVWGPHKIPAHTGSRYFLTIVDDFSRCTWIFLMHHKSETQSLLTNFVQFVKTQFH 884

Query: 8    S 6
            +
Sbjct: 885  T 885


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/120 (45%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
 Frame = -1

Query: 347 LWHTRLGHMPYNKLKCLHLHTG-----NIPDFPCTICAKARQTRLPFPHSQISSNKKFQL 183
           LWH RLGH    KL+ +          N  DF C +C  ++Q  LPF      S++ F L
Sbjct: 406 LWHKRLGHPSVQKLQPMSSLLSFPKQKNNTDFHCRVCHISKQKHLPFVSHNNKSSRPFDL 465

Query: 182 LHIDVWGPFSIPTYNKFRYFLTIVDDFTRTTWTHLLTNKSNAFTFIKSFIAFVETQFNST 3
           +HID WGPFS+ T++ +RYFLTIVDD++R TW +LL NKS+  T I +F+  VE QF +T
Sbjct: 466 IHIDTWGPFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETT 525


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/134 (42%), Positives = 75/134 (55%), Gaps = 7/134 (5%)
 Frame = -1

Query: 386 SLNSVSQCNK--SALLWHTRLGHMPYNKLKCLH----LHTGNIPDFP-CTICAKARQTRL 228
           S+     CN    + LWH+RLGH  Y K   LH    L   N  D   C+IC KA+Q  L
Sbjct: 570 SVTEKQYCNAVVDSALWHSRLGHPSYEKNDVLHDVLGLPKRNKEDLVHCSICQKAKQKHL 629

Query: 227 PFPHSQISSNKKFQLLHIDVWGPFSIPTYNKFRYFLTIVDDFTRTTWTHLLTNKSNAFTF 48
            FP     S  KF L+HID WGPF+ PT   ++YFLTIVDD++R TW +L+  K++    
Sbjct: 630 SFPSKNNMSENKFDLIHIDTWGPFATPTTEGYKYFLTIVDDYSRATWVYLMKAKNDVLQI 689

Query: 47  IKSFIAFVETQFNS 6
              F+  VETQ+ +
Sbjct: 690 FPDFLKMVETQYGT 703