BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036791
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...   175   4e-42
ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp....   167   8e-40
ref|XP_002512123.1| pentatricopeptide repeat-containing protein,...   166   1e-39
ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|NP_178437.1| pentatricopeptide repeat-containing protein [Ar...   162   3e-38

>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/124 (68%), Positives = 100/124 (80%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           LS CASV A   G ++H ++IK GLLS  +VY+GTALL+FYAKCGDAESARVIFD M EK
Sbjct: 446 LSACASVGAYRVGSSLHGYAIKAGLLS-GSVYVGTALLNFYAKCGDAESARVIFDEMGEK 504

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGRRYF 15
           N  TW+A+IGGYG+QGD S SL LF DML EK EPN++ FTTILSACSH+GM+ EG RYF
Sbjct: 505 NTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYF 564

Query: 14  SLMC 3
           + MC
Sbjct: 565 NTMC 568



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/116 (35%), Positives = 62/116 (53%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           LS CA   +L+ G +VH   IK+G     +     AL+  YAKC     AR +F+ + +K
Sbjct: 346 LSACAQTGSLNMGRSVHCLGIKLG---SEDATFENALVDMYAKCHMIGDARYVFETVFDK 402

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEG 27
           +   WN++I GY   G A  +L LF+ M ++   P+ IT  ++LSAC+  G    G
Sbjct: 403 DVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVG 458



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/117 (35%), Positives = 62/117 (52%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           ++ C  + ALH G  VH + IK G     N ++ T LL  Y KCGD   A  +FD +   
Sbjct: 245 VTACTKLGALHQGKWVHGYVIKSGFDL--NSFLVTPLLDLYFKCGDIRDAFSVFDELSTI 302

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGR 24
           +  +W A+I GY  +G    +L LF D   +   PN +T +++LSAC+  G +  GR
Sbjct: 303 DLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGR 359



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/117 (29%), Positives = 58/117 (49%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           L  C+ +     G  +H   +KVG     + ++ T L+  YAKC + E +R +FD + ++
Sbjct: 145 LKACSELRETDEGRKLHCQIVKVG---SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDR 201

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGR 24
           N   W ++I GY         L LFN M     E N  T  ++++AC+  G + +G+
Sbjct: 202 NVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGK 258



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           L +C +V++L     +HA  +  GL    ++   T L+S Y   G  E AR++FDR+   
Sbjct: 46  LGICKTVSSLR---KIHALLVVHGL--SEDLLCETKLVSLYGSFGHVECARLMFDRIRNP 100

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNE-KSEPNDITFTTILSACSHAGMIEEGRR 21
           + ++W  +I  Y +    S  +  +N  L +  +E +++ F+ +L ACS     +EGR+
Sbjct: 101 DLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRK 159


>ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297814638|ref|XP_002875202.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321039|gb|EFH51460.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321040|gb|EFH51461.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  167 bits (423), Expect = 8e-40
 Identities = 74/122 (60%), Positives = 100/122 (81%)
 Frame = -1

Query: 371 SVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEKN 192
           S CAS+ +L  G ++HA+S+K+G L+ ++V++GTALL FYAKCGDAESAR+IFD +EEKN
Sbjct: 463 SACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKN 522

Query: 191 QFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGRRYFS 12
             TW+A+IGGYG QGD  GSL LF +ML ++ +PN+ TFT++LSACSH GM+ EG++YFS
Sbjct: 523 TITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFS 582

Query: 11  LM 6
            M
Sbjct: 583 SM 584



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/116 (35%), Positives = 60/116 (51%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           LS C  V  L  G ++H  SIKVG+   N   +  AL+  YAKC     A+ +F+   EK
Sbjct: 362 LSGCGLVGNLELGRSIHGLSIKVGIWDTN---VANALVHMYAKCYQNRDAKYVFEMESEK 418

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEG 27
           +   WN++I G+   G    +L LF+ M  E   PN +T  ++ SAC+  G +  G
Sbjct: 419 DIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIG 474



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
 Frame = -1

Query: 365 CASVAALHFGYAVHAHSIKVG--LLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEKN 192
           C  + ALH G   H   IK G  L SC    + T+LL  Y KCGD  +AR +F+     +
Sbjct: 264 CTKLRALHQGKWFHGCLIKSGIELSSC----LVTSLLDMYVKCGDISNARRVFNEHSHVD 319

Query: 191 QFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGRRYFS 12
              W A+I GY   G  + +L+LF  M     +PN +T  ++LS C   G +E GR    
Sbjct: 320 LVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHG 379

Query: 11  L 9
           L
Sbjct: 380 L 380



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/117 (31%), Positives = 58/117 (49%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           L  C  V  L  G  +H   +KV   S +NV + T LL  YAKCG+ +S+  +F+ +  +
Sbjct: 161 LKACTEVQDLDNGKKIHCQIVKVP--SFDNVVL-TGLLDMYAKCGEIKSSYKVFEDITLR 217

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGR 24
           N   W ++I GY         L LFN M       N+ T+ T++ AC+    + +G+
Sbjct: 218 NVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGK 274


>ref|XP_002512123.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549303|gb|EEF50792.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  166 bits (421), Expect = 1e-39
 Identities = 79/123 (64%), Positives = 99/123 (80%)
 Frame = -1

Query: 371 SVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEKN 192
           S CAS+ AL  G ++HA+S+K GLLS +NVY+ TALL+FYAKCGDA SAR IFD M+EKN
Sbjct: 313 SACASLGALQVGSSLHAYSVKEGLLS-SNVYVSTALLTFYAKCGDAGSARTIFDGMQEKN 371

Query: 191 QFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGRRYFS 12
             TW+A+IGGYG+QGDA GSL++FNDML ++ +PN++ FTTILSACSH GM+ EG   F 
Sbjct: 372 TVTWSAMIGGYGVQGDAGGSLSIFNDMLRQELKPNEVIFTTILSACSHTGMVGEGWNLFI 431

Query: 11  LMC 3
            MC
Sbjct: 432 SMC 434



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 43/122 (35%), Positives = 62/122 (50%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           ++ C  + ALH G   H ++IK G+    N Y+ TALL  Y KCG    AR +FD +   
Sbjct: 111 VTACTKLGALHQGKCFHGYAIKSGVQL--NSYLMTALLDMYVKCGVIRDARSVFDELSSI 168

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGRRYF 15
           +  +W A+I GY     +  +L LF D       PND+T  + L+AC+  G +  GR   
Sbjct: 169 DLVSWTAMIVGYTQSNLSYDALKLFLDKKWAGILPNDVTIVSALAACARMGNLNLGRSIH 228

Query: 14  SL 9
            L
Sbjct: 229 GL 230



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/116 (31%), Positives = 59/116 (50%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           L+ CA +  L+ G ++H  +IK+G        +  AL+  YAKC     A  +F+   EK
Sbjct: 212 LAACARMGNLNLGRSIHGLAIKLGFAEPT---LMNALVHMYAKCHMNRDASYLFETASEK 268

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEG 27
           +  +WN++I G    G    +L LF  M  E   P+ +T  ++ SAC+  G ++ G
Sbjct: 269 DVVSWNSIISGCSQMGSPYEALDLFQRMRKESVSPDAVTLVSVFSACASLGALQVG 324



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/117 (29%), Positives = 57/117 (48%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           +  C+ +  +  G  +H   IK G     + ++ T L  FYAKCG+ E +R  FD   ++
Sbjct: 11  IRACSELRDIDEGRKLHCQIIKAGP---PDSFVLTGLTDFYAKCGEIECSRCAFDENLDR 67

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGR 24
           N  +W ++I GY         L LFN M     E N  T   +++AC+  G + +G+
Sbjct: 68  NVVSWTSMIVGYVQNDCPVEGLILFNRMREGLIEGNQFTLGILVTACTKLGALHQGK 124


>ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/124 (62%), Positives = 98/124 (79%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           LS CAS+  LH G +VH  ++K GL+  +++Y+GTALL+FYAKCGDA +AR++FD M EK
Sbjct: 446 LSACASLGMLHLGCSVHGLALKDGLV-VSSIYVGTALLNFYAKCGDARAARMVFDSMGEK 504

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGRRYF 15
           N  TW A+IGGYGMQGD +GSL LF DML E  EPN++ FTTIL+ACSH+GM+ EG R F
Sbjct: 505 NAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTTILAACSHSGMVGEGSRLF 564

Query: 14  SLMC 3
           +LMC
Sbjct: 565 NLMC 568



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/116 (37%), Positives = 64/116 (55%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           LS CA +     G  +H  ++K GL   ++  +  AL+  YAKCG    AR +F+ M EK
Sbjct: 346 LSSCAQLGNSVMGKLLHGLAVKCGL---DDHPVRNALVDMYAKCGVVSDARCVFEAMLEK 402

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEG 27
           +  +WN++I G+   G+A  +L LF  M  E   P+ +T   ILSAC+  GM+  G
Sbjct: 403 DVVSWNSIISGFVQSGEAYEALNLFRRMGLELFSPDAVTVVGILSACASLGMLHLG 458



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRME-- 201
           +S C  +  LH G  VH   IK G+  C N Y+ T+LL+ Y KCG+ + A  +FD     
Sbjct: 241 VSACTKLNWLHQGKWVHGFVIKNGI--CVNSYLTTSLLNMYVKCGNIQDACKVFDESSSS 298

Query: 200 --EKNQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAG 42
             +++  +W A+I GY  +G    +L LF D       PN +T +++LS+C+  G
Sbjct: 299 SYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLG 353


>ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
           gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis
           thaliana] gi|330250600|gb|AEC05694.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  162 bits (409), Expect = 3e-38
 Identities = 72/122 (59%), Positives = 98/122 (80%)
 Frame = -1

Query: 371 SVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEKN 192
           S CAS+ +L  G ++HA+S+K+G L+ ++V++GTALL FYAKCGD +SAR+IFD +EEKN
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN 510

Query: 191 QFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGRRYFS 12
             TW+A+IGGYG QGD  GSL LF +ML ++ +PN+ TFT+ILSAC H GM+ EG++YFS
Sbjct: 511 TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFS 570

Query: 11  LM 6
            M
Sbjct: 571 SM 572



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/116 (35%), Positives = 61/116 (52%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           LS C  +  L  G +VH  SIKVG+   N   +  AL+  YAKC     A+ +F+   EK
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGIWDTN---VANALVHMYAKCYQNRDAKYVFEMESEK 406

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEG 27
           +   WN++I G+   G    +L LF+ M +E   PN +T  ++ SAC+  G +  G
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVG--LLSCNNVYIGTALLSFYAKCGDAESARVIFDRME 201
           +  C  ++ALH G   H   +K G  L SC    + T+LL  Y KCGD  +AR +F+   
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSC----LVTSLLDMYVKCGDISNARRVFNEHS 304

Query: 200 EKNQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGRR 21
             +   W A+I GY   G  + +L+LF  M   + +PN +T  ++LS C     +E GR 
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364

Query: 20  YFSL 9
              L
Sbjct: 365 VHGL 368



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/117 (31%), Positives = 58/117 (49%)
 Frame = -1

Query: 374 LSVCASVAALHFGYAVHAHSIKVGLLSCNNVYIGTALLSFYAKCGDAESARVIFDRMEEK 195
           L  C  +  L  G  +H   +KV   S +NV + T LL  YAKCG+ +SA  +F+ +  +
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVP--SFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLR 205

Query: 194 NQFTWNAVIGGYGMQGDASGSLALFNDMLNEKSEPNDITFTTILSACSHAGMIEEGR 24
           N   W ++I GY         L LFN M       N+ T+ T++ AC+    + +G+
Sbjct: 206 NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGK 262