BLASTX nr result

ID: Bupleurum21_contig00036788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036788
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera]    84   6e-18
emb|CBI39039.3| unnamed protein product [Vitis vinifera]               80   3e-17
ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis tha...    74   3e-16
dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana]            72   1e-15
ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus...    72   1e-15

>emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera]
          Length = 150

 Score = 83.6 bits (205), Expect(2) = 6e-18
 Identities = 37/43 (86%), Positives = 38/43 (88%)
 Frame = +3

Query: 3   STHLSLYKNPLPRGEHKLQDEYVLDSRIHSRPDPPWNLLNLKK 131
           STHLS+YK PLPRGE KLQDEYVLDSRIHSRPDPPWN  NL K
Sbjct: 73  STHLSIYKKPLPRGEQKLQDEYVLDSRIHSRPDPPWNFRNLPK 115



 Score = 32.0 bits (71), Expect(2) = 6e-18
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +1

Query: 133 HSRRGLVMIFSKITRC*SGRIGGS 204
           HSRRG VMIFSKITR  +  + GS
Sbjct: 116 HSRRGFVMIFSKITRKANCLLAGS 139


>emb|CBI39039.3| unnamed protein product [Vitis vinifera]
          Length = 199

 Score = 80.5 bits (197), Expect(2) = 3e-17
 Identities = 36/43 (83%), Positives = 37/43 (86%)
 Frame = +3

Query: 3   STHLSLYKNPLPRGEHKLQDEYVLDSRIHSRPDPPWNLLNLKK 131
           STHLS+YK PL RGE KLQDEYVLDSRIHSRPDPPWN  NL K
Sbjct: 141 STHLSIYKKPLSRGEQKLQDEYVLDSRIHSRPDPPWNFWNLPK 183



 Score = 32.7 bits (73), Expect(2) = 3e-17
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +1

Query: 133 HSRRGLVMIFSKITRC 180
           HSRRG VMIFSKI RC
Sbjct: 184 HSRRGFVMIFSKIIRC 199


>ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis thaliana]
           gi|42570727|ref|NP_973437.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|44888124|sp|P93308.1|M530_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg00530;
           AltName: Full=ORF109 gi|1785714|emb|CAA69737.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|330250966|gb|AEC06060.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 109

 Score = 73.9 bits (180), Expect(2) = 3e-16
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   STHLSLYKNPLPRGEHKLQDEYVLDSRIHSRPDPPWNLLNLKK 131
           STHLS++K  LPRGE KLQDEY LDSRIHSRPDP WN  NL+K
Sbjct: 51  STHLSIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQK 93



 Score = 35.8 bits (81), Expect(2) = 3e-16
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 127 KNHSRRGLVMIFSKITRC 180
           + HSR+GLVMIFSKITRC
Sbjct: 92  QKHSRKGLVMIFSKITRC 109


>dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana]
          Length = 109

 Score = 72.0 bits (175), Expect(2) = 1e-15
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = +3

Query: 3   STHLSLYKNPLPRGEHKLQDEYVLDSRIHSRPDPPWNLLNLKK 131
           STHL ++K  LPRGE KLQDEY LDSRIHSRPDP WN  NL+K
Sbjct: 51  STHLPIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQK 93



 Score = 35.8 bits (81), Expect(2) = 1e-15
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 127 KNHSRRGLVMIFSKITRC 180
           + HSR+GLVMIFSKITRC
Sbjct: 92  QKHSRKGLVMIFSKITRC 109


>ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus]
           gi|353526373|ref|YP_004927448.1| orf159 (mitochondrion)
           [Brassica oleracea] gi|353526526|ref|YP_004927596.1|
           orf159 (mitochondrion) [Brassica carinata]
           gi|353526717|ref|YP_004927888.1| orf159 (mitochondrion)
           [Brassica rapa subsp. campestris]
           gi|353531399|ref|YP_004927791.1| orf159 (mitochondrion)
           [Brassica juncea] gi|37591072|dbj|BAC98874.1|
           hypothetical protein [Brassica napus]
           gi|335354905|gb|AEH43461.1| orf159 [Brassica rapa subsp.
           campestris] gi|335354918|gb|AEH43473.1| orf159 [Brassica
           oleracea] gi|335355057|gb|AEH43611.1| orf159 [Brassica
           carinata] gi|335355132|gb|AEH43685.1| orf159 [Brassica
           juncea] gi|339511333|emb|CBX48388.1| unnamed protein
           product [Brassica napus]
          Length = 159

 Score = 71.6 bits (174), Expect(2) = 1e-15
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = +3

Query: 3   STHLSLYKNPLPRGEHKLQDEYVLDSRIHSRPDPPWNLLNLKK 131
           S HLS++K  LPRGE KLQDEY LDSRIHSRPDP WN  NL+K
Sbjct: 101 SPHLSIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQK 143



 Score = 35.8 bits (81), Expect(2) = 1e-15
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 127 KNHSRRGLVMIFSKITRC 180
           + HSR+GLVMIFSKITRC
Sbjct: 142 QKHSRKGLVMIFSKITRC 159


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