BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036777
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]   100   1e-19
ref|XP_002524455.1| pentatricopeptide repeat-containing protein,...    94   1e-17
ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t...    87   1e-15
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15

>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/86 (53%), Positives = 60/86 (69%)
 Frame = +2

Query: 80  SPSLVTYPSTLCVLPASNPPYKXXXXXXXXXXXXKCKNMESFKQVHTQIIKTGLHNTQFV 259
           SPSLV  P TL   P S+PPYK             CK+ ++ KQ+H+QIIKTGLHNTQF 
Sbjct: 7   SPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFA 66

Query: 260 LSKMVEFCAVKPFADMYYALLIFDTI 337
           LSK++EFCA+ PF ++ YALL+F++I
Sbjct: 67  LSKLIEFCAISPFGNLSYALLLFESI 92


>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/86 (53%), Positives = 60/86 (69%)
 Frame = +2

Query: 80  SPSLVTYPSTLCVLPASNPPYKXXXXXXXXXXXXKCKNMESFKQVHTQIIKTGLHNTQFV 259
           SPSLV  P TL   P S+PPYK             CK+ ++ KQ+H+QIIKTGLHNTQF 
Sbjct: 7   SPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFA 66

Query: 260 LSKMVEFCAVKPFADMYYALLIFDTI 337
           LSK++EFCA+ PF ++ YALL+F++I
Sbjct: 67  LSKLIEFCAISPFGNLSYALLLFESI 92


>ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536243|gb|EEF37895.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 39/83 (46%), Positives = 57/83 (68%)
 Frame = +2

Query: 89  LVTYPSTLCVLPASNPPYKXXXXXXXXXXXXKCKNMESFKQVHTQIIKTGLHNTQFVLSK 268
           ++  P+ L +LP S+PPYK             CKN+++ KQ+H+Q+IKTGLHNT F LSK
Sbjct: 2   MIISPANLQILPFSDPPYKFLQTHPSLTLLSTCKNLKTLKQIHSQVIKTGLHNTHFALSK 61

Query: 269 MVEFCAVKPFADMYYALLIFDTI 337
           ++EFC + P+ D+ YALL+F +I
Sbjct: 62  LIEFCVISPYGDLSYALLLFKSI 84


>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 738

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/85 (51%), Positives = 56/85 (65%)
 Frame = +2

Query: 77  TSPSLVTYPSTLCVLPASNPPYKXXXXXXXXXXXXKCKNMESFKQVHTQIIKTGLHNTQF 256
           +SPS    PS L  LPAS+PPYK            KCKN+ +FKQ+H+ IIKTGL+NT F
Sbjct: 6   SSPS----PSILHFLPASDPPYKILEQHPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVF 61

Query: 257 VLSKMVEFCAVKPFADMYYALLIFD 331
           V SK++ FCAV P  D+ YAL +F+
Sbjct: 62  VQSKLIHFCAVSPSGDLSYALSLFE 86


>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
 Frame = +2

Query: 104 STLCVLPASNP--PYKXXXXXXXXXXXXKCKNMESFKQVHTQIIKTGLHNTQFVLSKMVE 277
           STL VL  S+P  PYK             CK +++ KQ+H+QIIKTGLHNT F LSK++E
Sbjct: 9   STLQVLSFSDPSPPYKLVHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIE 68

Query: 278 FCAVKPFADMYYALLIFDTI 337
           FCAV P  D+ YAL +F TI
Sbjct: 69  FCAVSPHGDLSYALSLFKTI 88