BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036762
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    95   5e-18
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    94   1e-17
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    90   2e-16
gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indi...    89   3e-16
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    89   5e-16

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/152 (32%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
 Frame = -3

Query: 459  KFIHQPQALVSRVFKARYFADSHLLRASKGTSSSFIWTRIYIAKEELLKGYRWILGDGKD 280
            + + +  +L SRVF++RYF++S  L A++G+  S+ W  I   +E L++G R ++G+G+ 
Sbjct: 871  RVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSYAWRSILFGRELLMQGLRTVIGNGQK 930

Query: 279  IVAVKDPWLRKKSDFKVENWHSYEGRNESVSSLFIPGTKQWNVDLIKSCFHEEDIKAILA 100
                 D WL   S+ +  N   +   +  VS L  P ++ WN+++++  F  +D++ IL 
Sbjct: 931  TFVWTDKWLHDGSNRRPLNRRRFINVDLKVSQLIDPTSRNWNLNMLRDLFPWKDVEIIL- 989

Query: 99   VYIPQREVC---DRVAWSHSQNGQYDVKTGYK 13
                QR +    D   W HS NG Y VKTGY+
Sbjct: 990  ---KQRPLFFKEDSFCWLHSHNGLYSVKTGYE 1018


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
 Frame = -3

Query: 459  KFIHQPQALVSRVFKARYFADSHLLRASKGTSSSFIWTRIYIAKEELLKGYRWILGDGKD 280
            + + +P +L++RV KA+Y+++   L A  G S+S+ W  I+ +K  L +G  W +G+G +
Sbjct: 876  RLVREPHSLLARVMKAKYYSNHDFLDAPLGVSTSYSWRSIWSSKALLKEGMVWRIGNGTN 935

Query: 279  IVAVKDPW-LRKKSDFKVENWHSYEGRNESVSSLFIPGTKQWNVDLIKSCFHEEDIKAIL 103
            +   +DPW L +   F     H   G    VS L      +W V LI++ F+E DIK IL
Sbjct: 936  VRIWEDPWVLDELGRFITSEKH---GNLNMVSELIDFDRMEWKVSLIETVFNERDIKCIL 992

Query: 102  AVYIPQREVCDRVAWSHSQNGQYDVKTGY 16
            ++ +    + D + W+ ++N  Y VKT Y
Sbjct: 993  SIPLSSLPLKDELTWAFTKNAHYSVKTAY 1021


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 51/148 (34%), Positives = 82/148 (55%)
 Frame = -3

Query: 459  KFIHQPQALVSRVFKARYFADSHLLRASKGTSSSFIWTRIYIAKEELLKGYRWILGDGKD 280
            + +H  ++L+SRV  A+Y+    +  A  G S S+ W  I+ AK  +L+G  W +GDG  
Sbjct: 879  RLLHNKESLLSRVMSAKYYPHGDVRYARLGYSHSYSWRSIWGAKSLVLEGLIWRVGDGTK 938

Query: 279  IVAVKDPWLRKKSDFKVENWHSYEGRNESVSSLFIPGTKQWNVDLIKSCFHEEDIKAILA 100
            I     PW+  +    +++    EG  E V  L     K+WNV+LI+  F+E D + ILA
Sbjct: 939  IDIWSAPWVGDEEGRFIKSAR-VEGL-EVVGDLMDVERKEWNVELIERHFNERDQQCILA 996

Query: 99   VYIPQREVCDRVAWSHSQNGQYDVKTGY 16
            + +  R + D + W++S++G Y VKT Y
Sbjct: 997  IPLSTRCLQDELTWAYSKDGTYSVKTAY 1024


>gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indica Group]
          Length = 961

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/150 (31%), Positives = 78/150 (52%)
 Frame = -3

Query: 459  KFIHQPQALVSRVFKARYFADSHLLRASKGTSSSFIWTRIYIAKEELLKGYRWILGDGKD 280
            + I  P +L ++V KA+YF    L+  +    SS  W  I    E L KG  W + DG  
Sbjct: 612  RLIQYPSSLCAQVLKAKYFPSGDLIDTAFPVDSSETWKGIMHGLELLKKGLIWRISDGSK 671

Query: 279  IVAVKDPWLRKKSDFKVENWHSYEGRNESVSSLFIPGTKQWNVDLIKSCFHEEDIKAILA 100
            +   +D W+ ++ + KV        R + VS L +P  +QWN +L+++ F+  D + IL 
Sbjct: 672  VKIWRDNWIPREHNLKVIG-RKTRSRLKWVSDLLLPDRQQWNEELVRNMFYPPDAEGILR 730

Query: 99   VYIPQREVCDRVAWSHSQNGQYDVKTGYKV 10
            + +P     D VAW + ++G + V++ YKV
Sbjct: 731  IQLPHSPGEDIVAWHYDKSGIFTVRSAYKV 760


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
 Frame = -3

Query: 459  KFIHQPQALVSRVFKARYFADSHLLRASKGTSSSFIWTRIYIAKEELLKGYRWILGDGKD 280
            + I +  +L+++VFK+RYF+ S  L A  G+  SF W  IY A+  + +G R ++G+G+ 
Sbjct: 872  RMITEKDSLMAKVFKSRYFSKSDPLNAPLGSRPSFAWKSIYEAQVLIKQGIRAVIGNGET 931

Query: 279  IVAVKDPWLRKK-----SDFKVENWHSYEGRN--ESVSSLFIPGTKQWNVDLIKSCFHEE 121
            I    DPW+  K        K  +  S    N    V  L +P  + WN +L+   F + 
Sbjct: 932  INVWTDPWIGAKPAKAAQAVKRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDN 991

Query: 120  DIKAILAVYIPQREVCDRVAWSHSQNGQYDVKTGYKVWQE 1
              + ILA+    +E  DR  W +S++G Y VK+GY V  E
Sbjct: 992  TQENILALRPGGKETRDRFTWEYSRSGHYSVKSGYWVMTE 1031