BLASTX nr result

ID: Bupleurum21_contig00036746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036746
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thali...   116   2e-24
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   115   3e-24
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...   113   1e-23
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           113   1e-23
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   113   1e-23

>gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 355

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/112 (49%), Positives = 76/112 (67%)
 Frame = +3

Query: 3   PIAYLGLPLITSRLSSHHCAPLVAKLCHRINSWTGRFLSFAGRLQLLKSIHSSIEGYWSL 182
           P+ YLGLPL+T  +++H   PL+ K+  RI+SWTGRFLS+ GRLQL+KS+  SI  +WS 
Sbjct: 13  PVRYLGLPLMTKAMTAHDYLPLIEKIRKRISSWTGRFLSYCGRLQLIKSVLMSITNFWSS 72

Query: 183 YIFLPKLILKKIQSMFGKFLWSGKLNQRVHYKVSWADCCLPFNEGGLGLRDL 338
              LP   +K+I+ +   FLWSG   +  + K++W+  CLP  EGGLGLR L
Sbjct: 73  AFRLPGNCMKEIERLCSAFLWSGPDLKTHNAKIAWSKVCLPMCEGGLGLRPL 124


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/112 (50%), Positives = 73/112 (65%)
 Frame = +3

Query: 3    PIAYLGLPLITSRLSSHHCAPLVAKLCHRINSWTGRFLSFAGRLQLLKSIHSSIEGYWSL 182
            P+ YLGLPL+T R++     PLV K+  RI SWT RFLSFAGRLQL+KS+ SSI  +W  
Sbjct: 915  PVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLS 974

Query: 183  YIFLPKLILKKIQSMFGKFLWSGKLNQRVHYKVSWADCCLPFNEGGLGLRDL 338
               LPK  L++I+ MF  FLWSG        K++W++ C    EGGLGL+ L
Sbjct: 975  VFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPL 1026


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/111 (45%), Positives = 72/111 (64%)
 Frame = +3

Query: 3   PIAYLGLPLITSRLSSHHCAPLVAKLCHRINSWTGRFLSFAGRLQLLKSIHSSIEGYWSL 182
           P+ YLGLPL+  RL S  C PL+ ++  RI SW+ R LSFAGRLQL++S+  S++ YW+ 
Sbjct: 35  PVRYLGLPLLFGRLQSCDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWAS 94

Query: 183 YIFLPKLILKKIQSMFGKFLWSGKLNQRVHYKVSWADCCLPFNEGGLGLRD 335
              LP  + + +  +   +LW GK   R   KV+W + CLPF+EGGL +RD
Sbjct: 95  VFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAIRD 145


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/110 (49%), Positives = 70/110 (63%)
 Frame = +3

Query: 3   PIAYLGLPLITSRLSSHHCAPLVAKLCHRINSWTGRFLSFAGRLQLLKSIHSSIEGYWSL 182
           PI YLGLPL+  +L      PL+ KL  R+ SW  + LSFAGR QL+ S+   +  +W  
Sbjct: 621 PIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMS 680

Query: 183 YIFLPKLILKKIQSMFGKFLWSGKLNQRVHYKVSWADCCLPFNEGGLGLR 332
              LPK  +KKI+S+  KFLW+G ++ R   KVSW DCCLP +EGGLG R
Sbjct: 681 TFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFR 730


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/110 (49%), Positives = 70/110 (63%)
 Frame = +3

Query: 3   PIAYLGLPLITSRLSSHHCAPLVAKLCHRINSWTGRFLSFAGRLQLLKSIHSSIEGYWSL 182
           PI YLGLPL+  +L      PL+ KL  R+ SW  + LSFAGR QL+ S+   +  +W  
Sbjct: 621 PIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMS 680

Query: 183 YIFLPKLILKKIQSMFGKFLWSGKLNQRVHYKVSWADCCLPFNEGGLGLR 332
              LPK  +KKI+S+  KFLW+G ++ R   KVSW DCCLP +EGGLG R
Sbjct: 681 TFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFR 730


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