BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036730
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]   141   6e-32
ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_002522032.1| pentatricopeptide repeat-containing protein,...   116   2e-24

>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
           gi|449518358|ref|XP_004166209.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
          Length = 455

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/114 (68%), Positives = 91/114 (79%)
 Frame = +3

Query: 3   YFATVHHISNIVRRDIYMERTLNKMGLSRIVNSELVYRVLRNCCNSGSQSFRFFNWVRTQ 182
           YFA +HHIS+IVRRD YMERTLNK+ +S + NSELV+RVLR C NSG++SFRFFNW  + 
Sbjct: 41  YFAAIHHISHIVRRDFYMERTLNKLRISNL-NSELVFRVLRACSNSGTESFRFFNWACSH 99

Query: 183 HPQYDPTTLEFEELLKNLARTRCWETMWKVAHQMKAQELPISPSVISFIIEHYG 344
           +P Y PTTLEFEEL+K LARTR + TMWKV  QMK Q L ISP  ISFII+ YG
Sbjct: 100 NPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISFIIQEYG 153


>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial [Vitis vinifera]
           gi|296085168|emb|CBI28663.3| unnamed protein product
           [Vitis vinifera]
          Length = 454

 Score =  143 bits (360), Expect = 2e-32
 Identities = 72/114 (63%), Positives = 90/114 (78%)
 Frame = +3

Query: 3   YFATVHHISNIVRRDIYMERTLNKMGLSRIVNSELVYRVLRNCCNSGSQSFRFFNWVRTQ 182
           YFA VHHIS IVRRD Y+ERTLNK+ +S  V S+LVYRVLR+C NSG++S RFFNW R+ 
Sbjct: 46  YFAVVHHISAIVRRDFYLERTLNKLPIS--VTSDLVYRVLRSCPNSGTESLRFFNWARS- 102

Query: 183 HPQYDPTTLEFEELLKNLARTRCWETMWKVAHQMKAQELPISPSVISFIIEHYG 344
           H  Y PTTLE+EELLK LART+ ++ MWK+AHQM+     +SP+V+S IIE +G
Sbjct: 103 HLSYQPTTLEYEELLKTLARTKQFQPMWKIAHQMQT----LSPTVVSSIIEEFG 152


>emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]
          Length = 356

 Score =  141 bits (355), Expect = 6e-32
 Identities = 71/113 (62%), Positives = 89/113 (78%)
 Frame = +3

Query: 6   FATVHHISNIVRRDIYMERTLNKMGLSRIVNSELVYRVLRNCCNSGSQSFRFFNWVRTQH 185
           FA VHHIS IVRRD Y+ERTLNK+ +S  V S+LVYRVLR+C NSG++S RFFNW R+ H
Sbjct: 4   FAVVHHISAIVRRDFYLERTLNKLPIS--VTSDLVYRVLRSCPNSGTESLRFFNWARS-H 60

Query: 186 PQYDPTTLEFEELLKNLARTRCWETMWKVAHQMKAQELPISPSVISFIIEHYG 344
             Y PTTLE+EELLK LART+ ++ MWK+AHQM+     +SP+V+S IIE +G
Sbjct: 61  XSYQPTTLEYEELLKTLARTKQFQPMWKIAHQMQT----LSPTVVSSIIEEFG 109


>ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Glycine max]
          Length = 450

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/115 (52%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   YFATVHHISNIVRRDIYMERTLNKMGLSRIVNSELVYRVLRNCCNSGSQSFRFFNWVRTQ 182
           YFA +HH+SNIVRRD Y+ERTLNK+ ++  V  ELV+RVLR C N+ ++S RFFNW RT 
Sbjct: 38  YFAVIHHVSNIVRRDFYLERTLNKLRIT--VTPELVFRVLRACSNNPTESLRFFNWART- 94

Query: 183 HPQYDPTTLEFEELLKNLARTRCWETMWKVAHQMKA-QELPISPSVISFIIEHYG 344
           HP Y PT+LEFE+++  LAR   +++MW +  Q+     L +SPS ++ +IE YG
Sbjct: 95  HPSYSPTSLEFEQIVTTLARANTYQSMWALIRQVTLHHRLSLSPSAVASVIEAYG 149


>ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538836|gb|EEF40436.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 451

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/116 (53%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
 Frame = +3

Query: 3   YFATVHHISNIVRRDIYMERTLNKMGLSRIVNSELVYRVLRNCCNSGSQSFRFFNWVRTQ 182
           YFA +HHI+NIVRRD Y ERTLNK  L+  V SELV+RVLR C  S ++S RFFNW R  
Sbjct: 40  YFALIHHITNIVRRDFYPERTLNK--LNAPVTSELVFRVLRACSRSPTESLRFFNWSRA- 96

Query: 183 HPQYDPTTLEFEELLKNLARTRCWETMWKVAHQMKAQ--ELPISPSVISFIIEHYG 344
              Y PT++E+EEL+K LA+++ + +MWK+  QMK Q  +  IS   +  IIE YG
Sbjct: 97  --YYTPTSIEYEELIKILAKSKRYSSMWKLITQMKDQNPQFSISSETVRSIIEEYG 150