BLASTX nr result

ID: Bupleurum21_contig00036725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036725
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234647.1| AP2 transcription factor SlAP2d [Solanum lyc...    57   2e-06

>ref|NP_001234647.1| AP2 transcription factor SlAP2d [Solanum lycopersicum]
           gi|333123373|gb|AEF28822.1| AP2 transcription factor
           SlAP2d [Solanum lycopersicum]
          Length = 496

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 39/158 (24%)
 Frame = -2

Query: 359 IMLDLNFGIANEQNYQEIDETGGSNSINKDANSSNDSGENE------------YSFEILK 216
           +MLDLN     +  +   DE+G SNS  ++  +S+ +G++E            ++F+ILK
Sbjct: 1   MMLDLNLNAIYDGKHSLADESGSSNSSARNVEASSSAGDDETCSTRAAGDMFAFNFDILK 60

Query: 215 VGGD-----------FVDKNEGQVHTISTQSEFVTRQLFPLSNNIN-NMAKCS------- 93
           VGG                N+ +      +S+FVT+QLFP+ NN   N    S       
Sbjct: 61  VGGGGSGSGGGETRRSCSNNDDEEGYDENRSDFVTQQLFPMDNNXELNRTHTSRRPDWVD 120

Query: 92  --------IVFNTLISRVPLQQPLKGVVAKKSRRGPRS 3
                   + F  +     LQQ  + V  KKSRRGPRS
Sbjct: 121 PSVDPPNTVSFREVQQMGRLQQQQQPV--KKSRRGPRS 156


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