BLASTX nr result

ID: Bupleurum21_contig00036660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036660
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   130   1e-28
ref|XP_004153593.1| PREDICTED: endoribonuclease Dicer homolog 3-...   130   1e-28
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   129   3e-28
emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]   120   2e-25
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   119   3e-25

>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score =  130 bits (327), Expect = 1e-28
 Identities = 68/118 (57%), Positives = 87/118 (73%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1    IDLYLVQKFVKSSVSSCGQVLLNAEQVRKSKCFQEFFFNGIFGKLFIRSDLE-KGRKFLL 177
            ++LYL+ K VK+SVS  G+V L+AEQ+ K+KCFQE FFNG+FG+LFI S    K R FLL
Sbjct: 748  LELYLLSKMVKASVSFGGEVHLDAEQITKAKCFQELFFNGLFGRLFIGSKTTGKKRDFLL 807

Query: 178  QTDV-PLWDSSNMFLLLPLEFAKNSSQEPWKIDWVGIDSCCSEVEFLKTNAWLSAEQS 348
            Q D  PLW SSNM+LLLP++   +S+ + WKI W  IDSC S VEFLK N+ L AE++
Sbjct: 808  QKDTNPLWISSNMYLLLPVDLPDDSTHDLWKIHWRAIDSCVSVVEFLKKNSSLDAERN 865


>ref|XP_004153593.1| PREDICTED: endoribonuclease Dicer homolog 3-like, partial [Cucumis
           sativus]
          Length = 257

 Score =  130 bits (327), Expect = 1e-28
 Identities = 68/118 (57%), Positives = 87/118 (73%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1   IDLYLVQKFVKSSVSSCGQVLLNAEQVRKSKCFQEFFFNGIFGKLFIRSDLE-KGRKFLL 177
           ++LYL+ K VK+SVS  G+V L+AEQ+ K+KCFQE FFNG+FG+LFI S    K R FLL
Sbjct: 97  LELYLLSKMVKASVSFGGEVHLDAEQITKAKCFQELFFNGLFGRLFIGSKTTGKKRDFLL 156

Query: 178 QTDV-PLWDSSNMFLLLPLEFAKNSSQEPWKIDWVGIDSCCSEVEFLKTNAWLSAEQS 348
           Q D  PLW SSNM+LLLP++   +S+ + WKI W  IDSC S VEFLK N+ L AE++
Sbjct: 157 QKDTNPLWISSNMYLLLPVDLPDDSTHDLWKIHWRAIDSCVSVVEFLKKNSSLDAERN 214


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
            gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1660

 Score =  129 bits (323), Expect = 3e-28
 Identities = 69/126 (54%), Positives = 89/126 (70%), Gaps = 3/126 (2%)
 Frame = +1

Query: 1    IDLYLVQKFVKSSVSSCGQVLLNAEQVRKSKCFQEFFFNGIFGKLFIRSDLEKG-RKFLL 177
            +DL+LV+K V++SVSSCGQV L+AEQ+ K+KCF E FFN +FGKLF  S   +  R+FLL
Sbjct: 770  LDLFLVRKTVRASVSSCGQVHLDAEQMMKAKCFHELFFNALFGKLFSGSKSSRSPREFLL 829

Query: 178  QTDVP-LWDSSNMFLLLPLEFAKNSSQEPWKIDWVGIDSCCSEVEFLKTNAWLSAEQ-SG 351
            Q +   LW  SNM+LLLPLE    SS E WKI+W G++ C + VEFLK N +L AE  +G
Sbjct: 830  QKETSLLWILSNMYLLLPLEAFSASSDESWKINWRGVNGCSNVVEFLKKNCFLGAEHYNG 889

Query: 352  NFIRGS 369
              +R S
Sbjct: 890  ERVRSS 895


>emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  120 bits (300), Expect = 2e-25
 Identities = 63/114 (55%), Positives = 81/114 (71%), Gaps = 2/114 (1%)
 Frame = +1

Query: 1    IDLYLVQKFVKSSVSSCGQVLLNAEQVRKSKCFQEFFFNGIFGKLFIRSDLE-KGRKFLL 177
            ++LYL+ KFV++SVSSCGQV L+AEQV K+  F E FFN +FG+LFI S      R+FLL
Sbjct: 1764 MELYLISKFVRTSVSSCGQVSLDAEQVMKAMXFHELFFNSLFGRLFIGSKSSGVRREFLL 1823

Query: 178  QT-DVPLWDSSNMFLLLPLEFAKNSSQEPWKIDWVGIDSCCSEVEFLKTNAWLS 336
             T    LW SSNM+LLLP+E +   S E W+I+W GI+SC S VEFL+  + LS
Sbjct: 1824 NTQQKSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKRSQLS 1877


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/114 (55%), Positives = 81/114 (71%), Gaps = 2/114 (1%)
 Frame = +1

Query: 1    IDLYLVQKFVKSSVSSCGQVLLNAEQVRKSKCFQEFFFNGIFGKLFIRSDLE-KGRKFLL 177
            ++LYL+ KFV++SVSSCGQV L+AEQV K+  F E FFN +FG+LFI S      R+FLL
Sbjct: 755  MELYLISKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGVRREFLL 814

Query: 178  QT-DVPLWDSSNMFLLLPLEFAKNSSQEPWKIDWVGIDSCCSEVEFLKTNAWLS 336
             T    LW SSNM+LLLP+E +   S E W+I+W GI+SC S VEFL+  + LS
Sbjct: 815  NTQQKSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKRSQLS 868


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