BLASTX nr result

ID: Bupleurum21_contig00036641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036641
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76786.1| hypothetical protein VITISV_032142 [Vitis vinifera]    80   2e-13
ref|XP_003632053.1| PREDICTED: F-box protein FBW2-like [Vitis vi...    77   2e-12
emb|CBI39373.3| unnamed protein product [Vitis vinifera]               77   2e-12
emb|CBI16981.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_002265399.1| PREDICTED: F-box/LRR-repeat protein At3g4888...    76   2e-12

>emb|CAN76786.1| hypothetical protein VITISV_032142 [Vitis vinifera]
          Length = 268

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/110 (42%), Positives = 68/110 (61%)
 Frame = +2

Query: 23  CCSCASLKVLSLANVDLSNIVDDTLAKLIVKSKSLEILKLGRCYNLVQIIDEIGTHCKNF 202
           C  C +LKVL L N DL       + +LI K ++LE L+L R  NL +I+ +I  HCKNF
Sbjct: 107 CLMCPALKVLELPN-DLLKRESSIIPELISKWRNLEQLRLERPSNLEEILHQISCHCKNF 165

Query: 203 FGLYVSQSDIDNAVALAVVSKIQTIKLLVLDNNQIQKETLVLMLQGCKQL 352
           FGL V  S++      A+VS +  IK L+L    I++++LV++LQGC +L
Sbjct: 166 FGLSVIDSEVWENEVSAIVS-LPNIKYLILRGTFIERKSLVMILQGCNKL 214


>ref|XP_003632053.1| PREDICTED: F-box protein FBW2-like [Vitis vinifera]
          Length = 269

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/107 (42%), Positives = 67/107 (62%)
 Frame = +2

Query: 32  CASLKVLSLANVDLSNIVDDTLAKLIVKSKSLEILKLGRCYNLVQIIDEIGTHCKNFFGL 211
           C +LKVL L N DL       + +LI K ++LE L+L R  NL +I+ +I  HCKNFFGL
Sbjct: 111 CPALKVLELPN-DLLKRESAIIPELISKWRNLEQLRLERPSNLEEILHQISCHCKNFFGL 169

Query: 212 YVSQSDIDNAVALAVVSKIQTIKLLVLDNNQIQKETLVLMLQGCKQL 352
            V  S++      A+VS +  IK L+L    I++++LV++LQGC +L
Sbjct: 170 SVIDSEVWENEVSAIVS-LPNIKYLILRGTFIERKSLVMILQGCNKL 215


>emb|CBI39373.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/107 (42%), Positives = 67/107 (62%)
 Frame = +2

Query: 32  CASLKVLSLANVDLSNIVDDTLAKLIVKSKSLEILKLGRCYNLVQIIDEIGTHCKNFFGL 211
           C +LKVL L N DL       + +LI K ++LE L+L R  NL +I+ +I  HCKNFFGL
Sbjct: 104 CPALKVLELPN-DLLKRESAIIPELISKWRNLEQLRLERPSNLEEILHQISCHCKNFFGL 162

Query: 212 YVSQSDIDNAVALAVVSKIQTIKLLVLDNNQIQKETLVLMLQGCKQL 352
            V  S++      A+VS +  IK L+L    I++++LV++LQGC +L
Sbjct: 163 SVIDSEVWENEVSAIVS-LPNIKYLILRGTFIERKSLVMILQGCNKL 208


>emb|CBI16981.3| unnamed protein product [Vitis vinifera]
          Length = 876

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/107 (37%), Positives = 68/107 (63%)
 Frame = +2

Query: 32   CASLKVLSLANVDLSNIVDDTLAKLIVKSKSLEILKLGRCYNLVQIIDEIGTHCKNFFGL 211
            C  LKVL + + ++S  ++  + + I K KSLE+++LG+ +++ +++ EIG HC NF  L
Sbjct: 690  CPRLKVLDVGDFNMS--IEAIIPQFISKWKSLEMMRLGK-FHMKEVLPEIGLHCNNFIWL 746

Query: 212  YVSQSDIDNAVALAVVSKIQTIKLLVLDNNQIQKETLVLMLQGCKQL 352
               ++ I    A A+V+ +  +K L L     +KETL+++LQGCKQL
Sbjct: 747  SAPETYIGKDEASAIVTSLPQLKYLDLHGASFEKETLLMILQGCKQL 793


>ref|XP_002265399.1| PREDICTED: F-box/LRR-repeat protein At3g48880 [Vitis vinifera]
           gi|147827252|emb|CAN77702.1| hypothetical protein
           VITISV_011386 [Vitis vinifera]
          Length = 285

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/107 (37%), Positives = 68/107 (63%)
 Frame = +2

Query: 32  CASLKVLSLANVDLSNIVDDTLAKLIVKSKSLEILKLGRCYNLVQIIDEIGTHCKNFFGL 211
           C  LKVL + + ++S  ++  + + I K KSLE+++LG+ +++ +++ EIG HC NF  L
Sbjct: 116 CPRLKVLDVGDFNMS--IEAIIPQFISKWKSLEMMRLGK-FHMKEVLPEIGLHCNNFIWL 172

Query: 212 YVSQSDIDNAVALAVVSKIQTIKLLVLDNNQIQKETLVLMLQGCKQL 352
              ++ I    A A+V+ +  +K L L     +KETL+++LQGCKQL
Sbjct: 173 SAPETYIGKDEASAIVTSLPQLKYLDLHGASFEKETLLMILQGCKQL 219


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