BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036638
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL76004.1|AF466646_12 putative gag-pol polyprotein [Zea mays]      97   2e-18
gb|ACF86440.1| unknown [Zea mays]                                      96   3e-18
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                   94   2e-17
gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis]            94   2e-17
gb|ABF67921.1| Ji1 putative pol protein [Zea mays]                     94   2e-17

>gb|AAL76004.1|AF466646_12 putative gag-pol polyprotein [Zea mays]
          Length = 1694

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/97 (45%), Positives = 67/97 (69%)
 Frame = +2

Query: 8    KPIHLLHMDLFGPVNKKSIAKKKYTLVIVDEFTRYTWVKFLFSKDEAGQMIIDHVNQNER 187
            +P+ LLHMDLFGP+   SI   KY LVIVD+++R+TWV FL  K +  + +   + + + 
Sbjct: 1019 RPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRTQN 1078

Query: 188  SSGLKVRVIRSDNGTEFRNAKMTGFFQEK*ILQTFSA 298
              GL+++ IRSDNGTEF+N+++ GF +E+ I   FS+
Sbjct: 1079 EFGLRIKKIRSDNGTEFKNSQIEGFLEEEGIKHEFSS 1115


>gb|ACF86440.1| unknown [Zea mays]
          Length = 305

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/97 (45%), Positives = 67/97 (69%)
 Frame = +2

Query: 8   KPIHLLHMDLFGPVNKKSIAKKKYTLVIVDEFTRYTWVKFLFSKDEAGQMIIDHVNQNER 187
           +P+ LLHMDLFGP+   SI   KY LVIVD+++R+TWV FL  K +  + +   + + + 
Sbjct: 63  RPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQN 122

Query: 188 SSGLKVRVIRSDNGTEFRNAKMTGFFQEK*ILQTFSA 298
             GL+++ IRSDNGTEF+N+++ GF +E+ I   FS+
Sbjct: 123 EFGLRIKKIRSDNGTEFKNSQIEGFLEEEGIKHEFSS 159


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/97 (44%), Positives = 66/97 (68%)
 Frame = +2

Query: 8   KPIHLLHMDLFGPVNKKSIAKKKYTLVIVDEFTRYTWVKFLFSKDEAGQMIIDHVNQNER 187
           +P+ LLHMDLFGP+   SI   KY LVIVD+++R+TWV FL  K +  + +   + + + 
Sbjct: 180 RPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQN 239

Query: 188 SSGLKVRVIRSDNGTEFRNAKMTGFFQEK*ILQTFSA 298
             GL+++ IRSDNGTEF+N+++  F +E+ I   FS+
Sbjct: 240 EFGLRIKKIRSDNGTEFKNSQIESFLEEEGIKHEFSS 276


>gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis]
          Length = 1063

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/97 (44%), Positives = 66/97 (68%)
 Frame = +2

Query: 8   KPIHLLHMDLFGPVNKKSIAKKKYTLVIVDEFTRYTWVKFLFSKDEAGQMIIDHVNQNER 187
           +P+ LLHMDLFGP+   SI   KY LVIVD+++R+TWV FL  K +  + +   + + + 
Sbjct: 180 RPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQN 239

Query: 188 SSGLKVRVIRSDNGTEFRNAKMTGFFQEK*ILQTFSA 298
              L+++ IRSDNGTEF+N+++ GF +E+ I   FS+
Sbjct: 240 EFSLRIKKIRSDNGTEFKNSQIEGFLEEEGIKHEFSS 276


>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
          Length = 1063

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/97 (44%), Positives = 66/97 (68%)
 Frame = +2

Query: 8   KPIHLLHMDLFGPVNKKSIAKKKYTLVIVDEFTRYTWVKFLFSKDEAGQMIIDHVNQNER 187
           +P+ LLHMDLFGP+   SI   KY LVIVD+++R+TWV FL  K +  + +   + + + 
Sbjct: 180 RPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQN 239

Query: 188 SSGLKVRVIRSDNGTEFRNAKMTGFFQEK*ILQTFSA 298
             GL+++ IRSDNGTEF+N+++  F +E+ I   FS+
Sbjct: 240 EFGLRIKKIRSDNGTEFKNSQIESFLEEEGIKHEFSS 276