BLASTX nr result

ID: Bupleurum21_contig00036628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036628
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]   195   3e-48
emb|CBI21510.3| unnamed protein product [Vitis vinifera]              195   4e-48
ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containi...   195   4e-48
ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containi...   188   4e-46
ref|XP_003630505.1| Pentatricopeptide repeat-containing protein ...   184   8e-45

>emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  195 bits (496), Expect = 3e-48
 Identities = 91/120 (75%), Positives = 106/120 (88%)
 Frame = +3

Query: 3   ACSHVGLVEDGFRHFNSMSRFRIEPGTEHYACMVSLLGRASKLSEAKSFIEKMPVQPAGI 182
           ACSH G VEDG  HFNSM  F I+PGTEHYAC+VSLLGR+ KL EAK FIEKMP++PA I
Sbjct: 551 ACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 610

Query: 183 VWRTLLSACRISGDAELGKYAAQMAISVEPEDSGSYILLSNIYASKGMWADVRSVREQMD 362
           VWR+LLSACRI+G+ ELGKYAA+MAIS +P+DSGSYILLSNI+ASKGMWADV+ VR++MD
Sbjct: 611 VWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMD 670


>emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  195 bits (495), Expect = 4e-48
 Identities = 91/120 (75%), Positives = 106/120 (88%)
 Frame = +3

Query: 3   ACSHVGLVEDGFRHFNSMSRFRIEPGTEHYACMVSLLGRASKLSEAKSFIEKMPVQPAGI 182
           ACSH G VEDG  HFNSM  F I+PGTEHYAC+VSLLGR+ KL EAK FIEKMP++PA I
Sbjct: 564 ACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 623

Query: 183 VWRTLLSACRISGDAELGKYAAQMAISVEPEDSGSYILLSNIYASKGMWADVRSVREQMD 362
           VWR+LLSACRI+G+ ELGKYAA+MAIS +P+DSGSYILLSNI+ASKGMWADV+ VR++MD
Sbjct: 624 VWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMD 683


>ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like
            [Vitis vinifera]
          Length = 825

 Score =  195 bits (495), Expect = 4e-48
 Identities = 91/120 (75%), Positives = 106/120 (88%)
 Frame = +3

Query: 3    ACSHVGLVEDGFRHFNSMSRFRIEPGTEHYACMVSLLGRASKLSEAKSFIEKMPVQPAGI 182
            ACSH G VEDG  HFNSM  F I+PGTEHYAC+VSLLGR+ KL EAK FIEKMP++PA I
Sbjct: 643  ACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 702

Query: 183  VWRTLLSACRISGDAELGKYAAQMAISVEPEDSGSYILLSNIYASKGMWADVRSVREQMD 362
            VWR+LLSACRI+G+ ELGKYAA+MAIS +P+DSGSYILLSNI+ASKGMWADV+ VR++MD
Sbjct: 703  VWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMD 762


>ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like
            [Glycine max]
          Length = 849

 Score =  188 bits (477), Expect = 4e-46
 Identities = 87/120 (72%), Positives = 103/120 (85%)
 Frame = +3

Query: 3    ACSHVGLVEDGFRHFNSMSRFRIEPGTEHYACMVSLLGRASKLSEAKSFIEKMPVQPAGI 182
            ACSH GL++ GF HF SMS+F IEPG +HYACMVSLLGRA K+ EAK F++KMP++PA +
Sbjct: 668  ACSHAGLLDLGFHHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAV 727

Query: 183  VWRTLLSACRISGDAELGKYAAQMAISVEPEDSGSYILLSNIYASKGMWADVRSVREQMD 362
            VWR+LLSACR+SG  ELG YAA+MAIS +P DSGSYILLSNI+ASKGMWA VR VRE+MD
Sbjct: 728  VWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMD 787


>ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355524527|gb|AET04981.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  184 bits (466), Expect = 8e-45
 Identities = 86/120 (71%), Positives = 102/120 (85%)
 Frame = +3

Query: 3    ACSHVGLVEDGFRHFNSMSRFRIEPGTEHYACMVSLLGRASKLSEAKSFIEKMPVQPAGI 182
            ACSH GL++ GF HF+SMS+F IEPG EHY CMVSLLGRA KL EAK FIEKMP++ A +
Sbjct: 655  ACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAV 714

Query: 183  VWRTLLSACRISGDAELGKYAAQMAISVEPEDSGSYILLSNIYASKGMWADVRSVREQMD 362
            VWR+LLSACR+SG+ ELG YAA+MAIS  P DSGSY+LLSNI+ASKGMW +VR +RE+MD
Sbjct: 715  VWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMD 774


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