BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036616
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...    48   2e-11
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...    42   2e-06

>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Vitis vinifera]
          Length = 572

 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = +2

Query: 65  GLSSKPVASLSVSPPQFSPTPISELPLQFT 154
           GLSSKP  S  +SPPQ +P+P+S+LPLQFT
Sbjct: 62  GLSSKPAVSSPISPPQVNPSPVSDLPLQFT 91



 Score = 45.4 bits (106), Expect(2) = 2e-11
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
 Frame = +3

Query: 216 YWDPHVPAEQLPVRSL-EYVPLGYTESALDDYRLQNQLQF 332
           YWDP V  +Q  V  L ++VP GY++S  DD+RLQ+Q+ F
Sbjct: 110 YWDPQVNGDQQQVHKLGDFVPQGYSDSLPDDFRLQSQIHF 149


>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score = 42.0 bits (97), Expect(2) = 2e-06
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = +3

Query: 216 YWDPHVPAEQLPVRSLEYVPLGYTESALDDYRLQNQLQF 332
           YWD  V  +Q  V +L++   GY+++  +DYRLQN +QF
Sbjct: 113 YWDAQVTGDQQQVPNLDFGSPGYSDTVPEDYRLQNHMQF 151



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 74  SKPVASLSVSPPQFSPTPISELPLQFT 154
           +KP  S  +SP Q + +P+S++PLQFT
Sbjct: 64  NKPALSAPISPSQVNTSPVSDIPLQFT 90