BLASTX nr result

ID: Bupleurum21_contig00036589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036589
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    75   4e-12
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002336811.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10

>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/105 (36%), Positives = 60/105 (57%)
 Frame = +3

Query: 21  SMPIWVKFSEIPDYYWTREGLSSLASAIGRPICADKLTSMMNPMVFAQFCISYSIEDPLP 200
           S+P+W+K   IP   WT  GL  +ASAIG+P+  D  T     + +A+ C+  +++  +P
Sbjct: 50  SVPVWIKLGRIPLELWTDAGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMP 109

Query: 201 DKLTVASIDPLSGEKSAVDIAVTYVQRPIVCSGCNSLGHTAAVCP 335
            ++TV     L GE+  V   VTY  +P  C+ C+S GH+ + CP
Sbjct: 110 IEITV----NLRGEEFIV--PVTYEWKPRKCNLCHSFGHSQSTCP 148


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/103 (34%), Positives = 51/103 (49%)
 Frame = +3

Query: 24  MPIWVKFSEIPDYYWTREGLSSLASAIGRPICADKLTSMMNPMVFAQFCISYSIEDPLPD 203
           +P+WV+   +P  YWT +GLS +ASAIG P+ AD  T +   + +A+ C+          
Sbjct: 240 VPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEID-----AS 294

Query: 204 KLTVASIDPLSGEKSAVDIAVTYVQRPIVCSGCNSLGHTAAVC 332
           K  V   D        + I+  Y   P  CS CN  GHT A+C
Sbjct: 295 KTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALC 337


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
 Frame = +3

Query: 15  VKSMPIWVKFSEIPDYYWTREGLSSLASAIGRPICADKLTSMMNPMVFAQFCISYSIEDP 194
           +KS P+W+K   +  + W+ E LS +AS +GRP+ AD +T+    + FA+ C+    +  
Sbjct: 122 LKSAPVWIKLPNLRLHLWSPEALSKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKM 181

Query: 195 LPDKLTVASIDPLSGEKSAVDIAVTYVQRPIV-CSGCNSLGHTAAVCPLTK 344
           LPD +T+        +  + D  V Y  +P   CS C  LGH+ + CP  K
Sbjct: 182 LPDSVTIE-----DDKGYSYDQKVEYEWQPTSRCSYCLHLGHSDS-CPRRK 226


>ref|XP_002336811.1| predicted protein [Populus trichocarpa] gi|222836943|gb|EEE75336.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/110 (34%), Positives = 53/110 (48%)
 Frame = +3

Query: 6   VGPVKSMPIWVKFSEIPDYYWTREGLSSLASAIGRPICADKLTSMMNPMVFAQFCISYSI 185
           VG    + +WV+   +P  YWT +GLS +ASAIG P+ AD  T +   + +A+ C+    
Sbjct: 58  VGQKLPVLVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLCKRLSYARVCVEID- 116

Query: 186 EDPLPDKLTVASIDPLSGEKSAVDIAVTYVQRPIVCSGCNSLGHTAAVCP 335
                 K  V   D        + I+  Y   P  CS CN  GHT A+CP
Sbjct: 117 ----ASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSDCNVFGHTTALCP 162


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/103 (33%), Positives = 51/103 (49%)
 Frame = +3

Query: 24  MPIWVKFSEIPDYYWTREGLSSLASAIGRPICADKLTSMMNPMVFAQFCISYSIEDPLPD 203
           +P+WV+   +P  YWT +GLS +ASA+G P+ AD  T +   + +A+ C+          
Sbjct: 240 VPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEID-----AS 294

Query: 204 KLTVASIDPLSGEKSAVDIAVTYVQRPIVCSGCNSLGHTAAVC 332
           K  V   D        + I+  Y   P  CS CN  GHT A+C
Sbjct: 295 KTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALC 337


Top