BLASTX nr result

ID: Bupleurum21_contig00036588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036588
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303000.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002528078.1| Myosin heavy chain, putative [Ricinus commun...    76   3e-12
ref|XP_002305176.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
emb|CAN79831.1| hypothetical protein VITISV_041029 [Vitis vinifera]    69   5e-10
ref|XP_002281016.2| PREDICTED: protein PLASTID MOVEMENT IMPAIRED...    68   7e-10

>ref|XP_002303000.1| predicted protein [Populus trichocarpa] gi|222844726|gb|EEE82273.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
 Frame = -1

Query: 329 EHSSLRKREQRSTRRDTSHFREGTRNAEAARAKTELELCDAKKTVKDLASRIEESNSRVK 150
           E SS R +E    +RD   ++E  R AE+A+ K E EL +AK+TVK+L  +IE+SN +VK
Sbjct: 44  EKSSSRAKELHMAKRDLVRYKENRRAAESAKVKAESELSEAKRTVKELVLQIEKSNLKVK 103

Query: 149 -KIEELEKQTK-SNELDQDKRCSNKEDERYAGIIKEVDHIKQDIKKLKADM 3
            ++ ++E+  K S   D      + E  +YA +I+E++ +KQ++ KLK +M
Sbjct: 104 AQVRDMERLNKLSKRQDMALIVGSDESHQYAEVIRELEGVKQELSKLKLEM 154


>ref|XP_002528078.1| Myosin heavy chain, putative [Ricinus communis]
           gi|223532539|gb|EEF34328.1| Myosin heavy chain, putative
           [Ricinus communis]
          Length = 650

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 4/113 (3%)
 Frame = -1

Query: 329 EHSSLRKREQRSTRRDTSHFREGTRNAEAARAKTELELCDAKKTVKDLASRIEESNS--- 159
           E SS R +E    +R+ + ++E  + AE+ + + E EL  A+KTVKDLA +IEESNS   
Sbjct: 42  EQSSSRAKELHLAKRNMARYKESRKIAESVKNQAESELSKARKTVKDLALQIEESNSQVK 101

Query: 158 -RVKKIEELEKQTKSNELDQDKRCSNKEDERYAGIIKEVDHIKQDIKKLKADM 3
            RV+ +E L+K +K      D + S++   +YA + KE++ +K+++ KLK DM
Sbjct: 102 ARVRDVETLKKSSKREGKGLDIK-SSESHHQYAEMKKELELVKEELSKLKLDM 153


>ref|XP_002305176.1| predicted protein [Populus trichocarpa] gi|222848140|gb|EEE85687.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
 Frame = -1

Query: 329 EHSSLRKREQRSTRRDTSHFREGTRNAEAARAKTELELCDAKKTVKDLASRIEESNSRVK 150
           E SS R ++ R   RD   ++E  R AE+A+ K E  L +AK+ VKDLA +IE+SN +VK
Sbjct: 44  EKSSSRAKDLRFAERDLVRYKESRRAAESAKGKAESRLSEAKRKVKDLALQIEQSNLKVK 103

Query: 149 ----KIEELEKQTKSNELDQDKRCSNKEDERYAGIIKEVDHIKQDIKKLKADM 3
                ++ L+K  K    D+     + E  +YA +I+E++ +KQ++ KL+ +M
Sbjct: 104 AQMRDMDMLKKLIKHE--DKALVVGSAESHQYAEVIRELEGVKQELSKLEIEM 154


>emb|CAN79831.1| hypothetical protein VITISV_041029 [Vitis vinifera]
          Length = 752

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
 Frame = -1

Query: 308 REQRSTRRDTSHFREGTRNAEAARAKTELELCDAKKTVKDLASRIEESNSRVK--KIEEL 135
           RE    RRD   F E  R A++ + + E EL +AKKTV+ L+S I ES ++ K   +E++
Sbjct: 131 RELLLARRDIGRFSESRRAADSMKIEAESELFNAKKTVRTLSSLINESKAKAKMQDLEDI 190

Query: 134 EKQTKSNELDQDKRCSNKEDERYAGIIKEVDHIKQDIKKLKADM 3
           +K  K  E  +       E+ +YA ++KEV+ +KQ++ KLK DM
Sbjct: 191 KKPEKREE-GRASDVGKAENYQYAEVMKEVEXMKQELSKLKLDM 233


>ref|XP_002281016.2| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Vitis
           vinifera]
          Length = 639

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
 Frame = -1

Query: 329 EHSSLRKREQRSTRRDTSHFREGTRNAEAARAKTELELCDAKKTVKDLASRIEESNSRVK 150
           E  S   RE    RRD   F E  R A++ + + E EL +AKKTV+ L+S I ES ++ K
Sbjct: 42  EKPSSIARELLLARRDIGRFSESRRAADSMKIEAESELFNAKKTVRTLSSLINESKAKAK 101

Query: 149 --KIEELEKQTKSNELDQDKRCSNKEDERYAGIIKEVDHIKQDIKKLKADM 3
              +E+++K  K  E  +       E+ +YA ++KEV+ +KQ++ KLK DM
Sbjct: 102 MQDLEDIKKPEKREE-GRASDVGKAENYQYAEVMKEVELMKQELSKLKLDM 151


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