BLASTX nr result

ID: Bupleurum21_contig00036558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036558
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002530980.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_002534631.1| hypothetical protein RCOM_0173910 [Ricinus c...    77   2e-12

>ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|222855824|gb|EEE93371.1|
           predicted protein [Populus trichocarpa]
          Length = 773

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/112 (61%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 VLRKPLSPETYKDYFAALLYAEDSYLEKWDGFEMKNVTLKLQKAELRGKKGKSEN-PINN 157
           VL + LSP TYKDYFAALLYAED Y+EKW  F++KN+ LKL+ A +  K+G++E    ++
Sbjct: 344 VLNEMLSPSTYKDYFAALLYAEDFYIEKWSKFKLKNIALKLKDAAIIKKRGRNEYFGESH 403

Query: 156 LKDDKIFVEFEVDAIPDKRPFLLSRDFAFVRPSGSVVDPFQGVIFRVVRSNI 1
            KD+K FVEFE+D+  +KRPFLLSRDFAF RPSG   +P+QGVI+RVVRS I
Sbjct: 404 EKDNKTFVEFEIDSCREKRPFLLSRDFAFARPSGQKTEPYQGVIYRVVRSTI 455


>ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|222852966|gb|EEE90513.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/110 (62%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
 Frame = -3

Query: 333 VLRKPLSPETYKDYFAALLYAEDSYLEKWDGFEMKNVTLKLQKAELRGKKGKSENPINNL 154
           VL KPLS  TYKDYFAALLYAED Y+EKW  F+++N+TLKLQ+AE+  K  ++E      
Sbjct: 262 VLNKPLSLSTYKDYFAALLYAEDFYIEKWSEFKLENITLKLQRAEIIKKSRRNEYRNETY 321

Query: 153 -KDDKIFVEFEVDAIPDKRPFLLSRDFAFVRPSGSVVDPFQGVIFRVVRS 7
            KDDKIFVEFE+D+  ++RPFLLSRDFAF RPSG + +P QG+I+RV RS
Sbjct: 322 EKDDKIFVEFEIDSCCERRPFLLSRDFAFARPSGQMTEPCQGIIYRVERS 371


>ref|XP_002530980.1| conserved hypothetical protein [Ricinus communis]
           gi|223529456|gb|EEF31415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 710

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 2/111 (1%)
 Frame = -3

Query: 333 VLRKPLSPETYKDYFAALLYAEDSYLEKWDGFEMKNVTLKLQKAELRGKK--GKSENPIN 160
           VL+KPLS  TYKDYFAALLYAED Y+EKW  F++  +T+KLQ+  +  +   GK      
Sbjct: 293 VLKKPLSLSTYKDYFAALLYAEDYYIEKWSKFKLVGITIKLQETAISKQIYFGKDYET-- 350

Query: 159 NLKDDKIFVEFEVDAIPDKRPFLLSRDFAFVRPSGSVVDPFQGVIFRVVRS 7
              D K  V FE+D+  +KRPFLLSRDF F RPSGS  +PFQG+I+RV RS
Sbjct: 351 ---DVKHLVAFEIDSSHEKRPFLLSRDFVFARPSGSTTEPFQGIIYRVQRS 398


>ref|XP_002534631.1| hypothetical protein RCOM_0173910 [Ricinus communis]
           gi|223524877|gb|EEF27754.1| hypothetical protein
           RCOM_0173910 [Ricinus communis]
          Length = 171

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = -3

Query: 255 EKWDGFEMKNVTLKLQKAEL-RGKKGKSENPINNLKDDKIFVEFEVDAIPDKRPFLLSRD 79
           +KW  F++  +TLKLQ+A + +G   +        KD+KIFV F +D+  +KRPFLLSRD
Sbjct: 7   QKWSEFKLLGITLKLQEAAIFKGPYIRESYE----KDEKIFVAFNMDSSLEKRPFLLSRD 62

Query: 78  FAFVRPSGSVVDPFQGVIFRVVRS 7
           F F + SGS  D FQG+I+RV RS
Sbjct: 63  FVFAKSSGSKTDLFQGIIYRVERS 86


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