BLASTX nr result

ID: Bupleurum21_contig00036553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036553
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36717.1| HD domain class transcription factor [Malus x dom...    53   5e-15
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    54   9e-15
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    58   3e-12
ref|XP_002300370.1| tir-nbs-lrr resistance protein [Populus tric...    47   1e-10
ref|XP_002316552.1| tir-nbs resistance protein [Populus trichoca...    51   2e-10

>gb|ADL36717.1| HD domain class transcription factor [Malus x domestica]
          Length = 561

 Score = 53.1 bits (126), Expect(2) = 5e-15
 Identities = 26/71 (36%), Positives = 45/71 (63%)
 Frame = +3

Query: 3   LTELAHLSGVPLQNTTNGYETKFIQKIVNIVKDGVDCNIRSIAPHHVGISASVNFIDLWL 182
           L +LA L+G+ L N  + Y++KFI KIV ++ D +      +  + +GI + V  I+LWL
Sbjct: 154 LAQLADLAGMVLSNQADRYKSKFITKIVKVIGDKLIRTPLGVESNLIGIQSRVKRINLWL 213

Query: 183 RNGSAEVEVLA 215
           ++GS +V ++A
Sbjct: 214 QDGSTDVGIVA 224



 Score = 52.4 bits (124), Expect(2) = 5e-15
 Identities = 25/55 (45%), Positives = 36/55 (65%)
 Frame = +1

Query: 217 KTTIVKYAYNMNTKYFDRANFLENTREYSEQSDDLLCLQRQLLSDICRGKTPMIN 381
           KTTI KY YN N   F+ ++F+EN RE + Q + L+ +Q QLL DI +GK   ++
Sbjct: 233 KTTIAKYVYNSNFTSFEGSSFVENIRETASQPNGLVQMQMQLLYDILKGKEEKVH 287


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
           gi|223543328|gb|EEF44860.1| TMV resistance protein N,
           putative [Ricinus communis]
          Length = 1186

 Score = 54.3 bits (129), Expect(2) = 9e-15
 Identities = 28/54 (51%), Positives = 34/54 (62%)
 Frame = +1

Query: 217 KTTIVKYAYNMNTKYFDRANFLENTREYSEQSDDLLCLQRQLLSDICRGKTPMI 378
           KTTI K  YN N + FD  +FL N +E SEQ + L  LQRQLLSD+ +  T  I
Sbjct: 229 KTTIAKIVYNQNFRSFDGRSFLANVKEISEQPNGLARLQRQLLSDLLKKNTSKI 282



 Score = 50.4 bits (119), Expect(2) = 9e-15
 Identities = 28/69 (40%), Positives = 43/69 (62%)
 Frame = +3

Query: 3   LTELAHLSGVPLQNTTNGYETKFIQKIVNIVKDGVDCNIRSIAPHHVGISASVNFIDLWL 182
           L E A L G+ LQ+   GYE++FIQ IV  V++ +   +  +AP+ VG  + +  I  WL
Sbjct: 153 LKEAAELGGMVLQD---GYESQFIQTIVKEVENKLSRTVLHVAPYLVGTESRMARITRWL 209

Query: 183 RNGSAEVEV 209
           R+GS +VE+
Sbjct: 210 RDGSDDVEI 218


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223541425|gb|EEF42975.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 58.2 bits (139), Expect(2) = 3e-12
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = +1

Query: 217 KTTIVKYAYNMNTKYFDRANFLENTREYSEQSDDLLCLQRQLLSDICRGKTPMI 378
           KTT+ K  +N N   FD A+FL N RE SEQS+ L+ LQR++LSD+ +GKT  I
Sbjct: 231 KTTLAKIIFNQNFDKFDGASFLANVRETSEQSNGLVRLQRKVLSDLLKGKTSKI 284



 Score = 38.1 bits (87), Expect(2) = 3e-12
 Identities = 21/69 (30%), Positives = 43/69 (62%)
 Frame = +3

Query: 3   LTELAHLSGVPLQNTTNGYETKFIQKIVNIVKDGVDCNIRSIAPHHVGISASVNFIDLWL 182
           L E+A + G+ L+N    ++++FIQ IV  V + ++  + ++A + VGI + +  I+ WL
Sbjct: 155 LREVADMGGMVLENR---HQSQFIQNIVKEVGNKLNRVVLNVASYLVGIDSRIADINSWL 211

Query: 183 RNGSAEVEV 209
           ++ S +V +
Sbjct: 212 QDDSKDVGI 220


>ref|XP_002300370.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222847628|gb|EEE85175.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 503

 Score = 47.4 bits (111), Expect(2) = 1e-10
 Identities = 25/69 (36%), Positives = 41/69 (59%)
 Frame = +3

Query: 3   LTELAHLSGVPLQNTTNGYETKFIQKIVNIVKDGVDCNIRSIAPHHVGISASVNFIDLWL 182
           L E+A L+G+ L +   GYE +F+Q IV  V   +D  +  +  H +G    VN+I+ WL
Sbjct: 134 LKEVADLAGMVLGD---GYEAQFVQSIVEKVSKNLDRKLFHVPLHFIGRDPLVNYINSWL 190

Query: 183 RNGSAEVEV 209
           ++GS +V +
Sbjct: 191 QDGSHDVVI 199



 Score = 43.5 bits (101), Expect(2) = 1e-10
 Identities = 26/55 (47%), Positives = 33/55 (60%)
 Frame = +1

Query: 217 KTTIVKYAYNMNTKYFDRANFLENTREYSEQSDDLLCLQRQLLSDICRGKTPMIN 381
           KTTI K  +N N   F+  +FL   R     S D++CLQRQL+SDI + KT  IN
Sbjct: 210 KTTIAKSVFNQNIHKFEGKSFLSKFR-----SKDIVCLQRQLISDILK-KTVEIN 258


>ref|XP_002316552.1| tir-nbs resistance protein [Populus trichocarpa]
           gi|222859617|gb|EEE97164.1| tir-nbs resistance protein
           [Populus trichocarpa]
          Length = 500

 Score = 50.8 bits (120), Expect(2) = 2e-10
 Identities = 23/46 (50%), Positives = 32/46 (69%)
 Frame = +1

Query: 217 KTTIVKYAYNMNTKYFDRANFLENTREYSEQSDDLLCLQRQLLSDI 354
           KT I K  +N N + F+  ++L N RE S++S  ++CLQRQLLSDI
Sbjct: 209 KTAIAKSVFNQNFRKFESRSYLSNVREISKESKGVVCLQRQLLSDI 254



 Score = 39.3 bits (90), Expect(2) = 2e-10
 Identities = 23/69 (33%), Positives = 37/69 (53%)
 Frame = +3

Query: 3   LTELAHLSGVPLQNTTNGYETKFIQKIVNIVKDGVDCNIRSIAPHHVGISASVNFIDLWL 182
           L E+A L+G+ L +   GYE   +Q IV  V   +D  I  +  H +G    VN+I+ WL
Sbjct: 133 LKEVADLAGMVLGD---GYEALLVQCIVGKVSKNLDRKIFHVPLHFIGRDPLVNYINSWL 189

Query: 183 RNGSAEVEV 209
           ++ S +  +
Sbjct: 190 QDESHDAAI 198


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