BLASTX nr result

ID: Bupleurum21_contig00036530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036530
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605523.1| Helicase-like protein [Medicago truncatula] ...    68   3e-19
gb|EEC77075.1| hypothetical protein OsI_15473 [Oryza sativa Indi...    76   9e-19
ref|XP_003625751.1| Helicase-like protein [Medicago truncatula] ...    65   2e-18
ref|XP_003598182.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    68   3e-18
ref|XP_003607945.1| Helicase-like protein [Medicago truncatula] ...    66   4e-18

>ref|XP_003605523.1| Helicase-like protein [Medicago truncatula]
            gi|355506578|gb|AES87720.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1585

 Score = 67.8 bits (164), Expect(2) = 3e-19
 Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
 Frame = -2

Query: 428  LLMPNGRTDHSRFHIQLDLTEESTC----VXXXXXXXXXXXXXIWDEAPKANKFCFEALD 261
            LL+P GRT HSRF I + + E STC                  IWDEAP  +K CFEALD
Sbjct: 1166 LLIPGGRTAHSRFGIPIIVDEISTCGIHPKSPLAELVSKAKLIIWDEAPMMHKHCFEALD 1225

Query: 260  KSLRDILSTKDNDNKNKSFSGFTVICG 180
            +SLRDIL  ++N   +  F G  V+ G
Sbjct: 1226 RSLRDILRVQNNGRTDIPFGGKVVVLG 1252



 Score = 52.0 bits (123), Expect(2) = 3e-19
 Identities = 23/43 (53%), Positives = 32/43 (74%)
 Frame = -1

Query: 180  GDFRQILSVIPKGRRVDIIDTSLNSSYL*QFFTIYELNQNMRL 52
            GDFRQ+L V+PK  R ++++ S+NSSYL QF  +  L+ NMRL
Sbjct: 1253 GDFRQVLPVMPKANRQEVVNASINSSYLWQFCEVLTLSTNMRL 1295


>gb|EEC77075.1| hypothetical protein OsI_15473 [Oryza sativa Indica Group]
          Length = 943

 Score = 76.3 bits (186), Expect(2) = 9e-19
 Identities = 40/87 (45%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
 Frame = -2

Query: 428 LLMPNGRTDHSRFHIQLDLTEESTCVXXXXXXXXXXXXXI----WDEAPKANKFCFEALD 261
           LL+P GRT HSRF I LD+ E S C                   WDEAP  ++ CFEALD
Sbjct: 519 LLLPGGRTPHSRFRIPLDIQEHSLCAIKKNTHLAQLIQQTSLVIWDEAPVNHRHCFEALD 578

Query: 260 KSLRDILSTKDNDNKNKSFSGFTVICG 180
           ++LRDILS+ D    +K F G TV+ G
Sbjct: 579 RTLRDILSSNDPSLLDKQFGGLTVVFG 605



 Score = 42.0 bits (97), Expect(2) = 9e-19
 Identities = 20/59 (33%), Positives = 34/59 (57%)
 Frame = -1

Query: 180 GDFRQILSVIPKGRRVDIIDTSLNSSYL*QFFTIYELNQNMRLHNDNLTYSDA*KIVDF 4
           GDFRQ L V+P  ++ +I+  S+  SYL     +  L +NMRL +  L+ +   ++ +F
Sbjct: 606 GDFRQTLPVLPNAKKHEILSASITRSYLWSHCIVLHLTENMRLRSPLLSGAQRNRLQEF 664


>ref|XP_003625751.1| Helicase-like protein [Medicago truncatula]
           gi|355500766|gb|AES81969.1| Helicase-like protein
           [Medicago truncatula]
          Length = 689

 Score = 65.5 bits (158), Expect(2) = 2e-18
 Identities = 39/87 (44%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
 Frame = -2

Query: 428 LLMPNGRTDHSRFHIQLDLTEESTC----VXXXXXXXXXXXXXIWDEAPKANKFCFEALD 261
           LL+P GRT HSRF I + + E STC                  IWDEAP  +K CFEALD
Sbjct: 296 LLIPGGRTAHSRFGIPIIVDEISTCGIHPKSPLAELVCKAKLIIWDEAPMMHKHCFEALD 355

Query: 260 KSLRDILSTKDNDNKNKSFSGFTVICG 180
            SLRDIL   +N   +  F G  V+ G
Sbjct: 356 LSLRDILRVHNNGRTDIPFEGKVVVLG 382



 Score = 52.0 bits (123), Expect(2) = 2e-18
 Identities = 23/43 (53%), Positives = 32/43 (74%)
 Frame = -1

Query: 180 GDFRQILSVIPKGRRVDIIDTSLNSSYL*QFFTIYELNQNMRL 52
           GDF Q+L V+PK  R ++++TS+NSSYL QF  +  L+ NMRL
Sbjct: 383 GDFHQVLPVMPKANRQEVVNTSINSSYLWQFCEVLTLSTNMRL 425


>ref|XP_003598182.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355487230|gb|AES68433.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 490

 Score = 67.8 bits (164), Expect(2) = 3e-18
 Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
 Frame = -2

Query: 428 LLMPNGRTDHSRFHIQLDLTEESTCVXXXXXXXXXXXXXI----WDEAPKANKFCFEALD 261
           +L+P GRT HSRF I +   + S C                   WDEAP ANKFCFEALD
Sbjct: 34  VLLPGGRTAHSRFKIPVPTLKSSICNIEKGTELAELLRQTKLIIWDEAPMANKFCFEALD 93

Query: 260 KSLRDILSTKDNDNKNKSFSGFTVICG 180
           KSL+DI+S +   +K   F G T++ G
Sbjct: 94  KSLKDIMSVRGKPSK-LIFGGKTIVFG 119



 Score = 48.5 bits (114), Expect(2) = 3e-18
 Identities = 22/43 (51%), Positives = 32/43 (74%)
 Frame = -1

Query: 180 GDFRQILSVIPKGRRVDIIDTSLNSSYL*QFFTIYELNQNMRL 52
           GDFRQIL V+P G R DII +++N+SY+     + +L++NMRL
Sbjct: 120 GDFRQILPVVPGGNRFDIIHSTINASYIWDHCHVLKLSKNMRL 162


>ref|XP_003607945.1| Helicase-like protein [Medicago truncatula]
            gi|355509000|gb|AES90142.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1651

 Score = 66.2 bits (160), Expect(2) = 4e-18
 Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
 Frame = -2

Query: 428  LLMPNGRTDHSRFHIQLDLTEESTCVXXXXXXXXXXXXXI----WDEAPKANKFCFEALD 261
            LL+P GRT HS+F I +   E STC                   WDEAP A+KFCFEALD
Sbjct: 1232 LLLPGGRTAHSKFKIPVPSFENSTCNIDGDSDLAKLLKVTNLIIWDEAPMAHKFCFEALD 1291

Query: 260  KSLRDILSTKDNDNKNKSFSGFTVICG 180
            ++L+DI+S  D  + +K F G  ++ G
Sbjct: 1292 RTLKDIMS--DTADGDKIFGGKVIVFG 1316



 Score = 49.7 bits (117), Expect(2) = 4e-18
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = -1

Query: 180  GDFRQILSVIPKGRRVDIIDTSLNSSYL*QFFTIYELNQNMRLHNDNLTYSDA*KIVDF 4
            GDFRQIL V+P+  R DII++S+NSSY+     +  L +NMRL   N+  SDA ++  F
Sbjct: 1317 GDFRQILPVVPRADRSDIINSSINSSYIWDECIVLTLTKNMRL-RFNVGSSDADELKTF 1374


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