BLASTX nr result

ID: Bupleurum21_contig00036505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036505
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC05653.1| OJ1005_B10.22 [Oryza sativa Japonica Group]            95   5e-18
gb|EAZ12157.1| hypothetical protein OsJ_02038 [Oryza sativa Japo...    89   3e-16
ref|XP_003565576.1| PREDICTED: uncharacterized protein LOC100828...    76   2e-12
gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]      73   3e-11
gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]      72   6e-11

>dbj|BAC05653.1| OJ1005_B10.22 [Oryza sativa Japonica Group]
          Length = 305

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 7/97 (7%)
 Frame = -1

Query: 366 LKGRWAILRSPSFFPIRTQDRIVSACALIHNLIRKHMPTDFEIDEDSDGNNS-------D 208
           LKGRWAILRSPS+FPI+TQ RI+ ACAL+HNLI + M +D   DED D +         +
Sbjct: 210 LKGRWAILRSPSYFPIKTQCRIIMACALLHNLILQKMSSDPFEDEDEDEDEDEIPLDILE 269

Query: 207 GEESDDEAEYITHVQSLDSWNNFRNNLAQTLFNTWRA 97
           GE +  E E+I+ + + D W NFRN LA  ++N++RA
Sbjct: 270 GELA--EPEFISAISTSDDWTNFRNTLAHGMYNSYRA 304


>gb|EAZ12157.1| hypothetical protein OsJ_02038 [Oryza sativa Japonica Group]
          Length = 598

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 8/99 (8%)
 Frame = -1

Query: 366 LKGRWAILRSPSFFPIRTQDRIVSACALIHNLIRKHMPTDFEIDEDSDGNNS-------D 208
           LKGRWAILRSPS+FPI+TQ RI+ ACAL+HNLI + M +D   DED D +         +
Sbjct: 192 LKGRWAILRSPSYFPIKTQCRIIMACALLHNLILQKMSSDPFEDEDEDEDEDEIPLDILE 251

Query: 207 GEESDDEAEYITHVQSLDSWNNFRNNLAQTLFN-TWRAR 94
           GE +  E E+I+ + + D W NFRN LA  ++  +W+ +
Sbjct: 252 GELA--EPEFISAISTSDDWTNFRNTLAHGIYGASWKLK 288


>ref|XP_003565576.1| PREDICTED: uncharacterized protein LOC100828579 [Brachypodium
           distachyon]
          Length = 156

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = -1

Query: 366 LKGRWAILRSPSFFPIRTQDRIVSACALIHNLIRKHMPTDFEIDEDSDGNNSDGEESDDE 187
           +K +WAILRSP F+P++TQ RI+ AC L+HNLI +   T  + DED      D  E +  
Sbjct: 66  IKNKWAILRSPCFYPLKTQCRIIMACGLLHNLILEE--TGDDEDEDEFVVEQDIHEGEHH 123

Query: 186 A-EYITHVQSLDSWNNFRNNLAQTLFNTWRA 97
           A E+IT + S + W + R+ +AQ ++N +RA
Sbjct: 124 APEFITSISSSNEWTHRRDVMAQEMYNNYRA 154


>gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 623

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 30/91 (32%), Positives = 60/91 (65%)
 Frame = -1

Query: 366 LKGRWAILRSPSFFPIRTQDRIVSACALIHNLIRKHMPTDFEIDEDSDGNNSDGEESDDE 187
           LKGRW ILR  S++P++ Q R + AC L+HNLI + M    +++++ +G+++    +   
Sbjct: 247 LKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDST--YATTTA 304

Query: 186 AEYITHVQSLDSWNNFRNNLAQTLFNTWRAR 94
           +E I ++++ + W+ +R++LA ++F  W+ R
Sbjct: 305 SEDIQYIETTNEWSQWRDDLATSMFTDWQFR 335


>gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 657

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/87 (37%), Positives = 57/87 (65%)
 Frame = -1

Query: 366 LKGRWAILRSPSFFPIRTQDRIVSACALIHNLIRKHMPTDFEIDEDSDGNNSDGEESDDE 187
           LKGRWAILR  S++P+  Q R + AC L+HNLI + M T+F+I+++ D    D   +   
Sbjct: 275 LKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM-TNFDIEDNID--EVDSTHATTA 331

Query: 186 AEYITHVQSLDSWNNFRNNLAQTLFNT 106
           A+ I ++++ + W+ +R+NLA+ +  +
Sbjct: 332 ADDIHYIETSNEWSQWRDNLAEEIMTS 358


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